RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C11orf40Q8WZ69 217 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ERGIC1Q969X5 290 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OR10C1Q96KK4 312 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 POM121L2Q96KW2 1035 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ANKRD10Q9NXR5 420 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 USP22Q9UPT9 525 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 M0R3E3 92 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PIRO00625 290 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 T-ENOLP0DO92 83 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 APEX1P27695 318 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 PRRX1P54821 245 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LSAMPQ13449 338 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 THEM4Q5T1C6 240 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM184AQ6ZMB5 413 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 VRK3Q8IV63 474 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 Q8IYB0 196 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DEFB106AQ8N104 65 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 MGLLQ99685 303 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SIRT5Q9NXA8 310 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 A4GNTQ9UNA3 340 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 RPH3ALQ9UNE2 315 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 COQ4Q9Y3A0 265 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 MMP24Q9Y5R2 645 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 BICRAQ9NZM4 1560 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 DLG5Q8TDM6 1919 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LOC100130705A0A1B0GUX0 176 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 RBMY1BA6NDE4 496 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 RBMY1EA6NEQ0 496 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 EPHB6O15197 1021 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HAND1O96004 215 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 RBMY1DP0C7P1 496 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 RBMY1A1P0DJD3 496 aaKnown RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 RBMY1CP0DJD4 496 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LAMP1P11279 417 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HOXB2P14652 356 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 GLRA2P23416 452 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PPP1CBP62140 327 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 SLC14A1Q13336 389 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LINGO4Q6UY18 593 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 ABI3BPQ7Z7G0 1075 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM200AQ86VY9 491 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TEX26Q8N6G2 289 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 NAT8LQ8N9F0 302 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 MTMR14Q8NCE2 650 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 TMEM230Q96A57 120 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PHOX2BQ99453 314 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OSMRQ99650 979 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 OVOL2Q9BRP0 275 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 PLA2G12BQ9BX93 195 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 HEYLQ9NQ87 328 aaPredicted RBP5.07□□□□□ -1.6
USF3-202ENST00000478658 PGPEP1Q9NXJ5 209 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 USP32Q8NFA0 1604 aa5.07□□□□□ -1.6
USF3-202ENST00000478658 LOC102723996A0A087X1L8 192 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SERPINE3A8MV23 424 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 E5RJQ4 531 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 JTBO76095 146 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 IGHDP01880 384 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 F3P13726 295 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 JAG1P78504 1218 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 GALNT2Q10471 571 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NFATC2Q13469 925 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NKG7Q16617 165 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 HSF5Q4G112 596 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 COL5A1-AS1Q5SY13 56 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 C10orf126Q8N4M7 172 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF519Q8TB69 540 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 DPH2Q9BQC3 489 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 COMMD5Q9GZQ3 224 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR14J1Q9UGF5 321 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CDC42EP3Q9UKI2 254 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 V9GYS6 101 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CEP170BQ9Y4F5 1589 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 FAM159BA6NKW6 160 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SH2D1BO14796 132 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TOX3O15405 576 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 PHF1O43189 567 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 NUDT21O43809 227 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 MPDU1O75352 247 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLCO2B1O94956 709 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 NAGAP17050 411 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TNFRSF1AP19438 455 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 CDKN2BP42772 138 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SRP9P49458 86 aaKnown RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 DEFB115Q30KQ5 88 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 S100A7L2Q5SY68 101 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TMUB2Q71RG4 321 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 SLC39A11Q8N1S5 342 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 TMEM151AQ8N4L1 468 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF485Q8NCK3 441 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 OR51S1Q8NGJ8 323 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 Q8WTZ3 238 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 ADAMTS14Q8WXS8 1223 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 ZNF707Q96C28 371 aaPredicted RBP5.06□□□□□ -1.6
USF3-202ENST00000478658 ELOVL1Q9BW60 279 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 FZD8Q9H461 694 aa5.06□□□□□ -1.6
USF3-202ENST00000478658 MEAF6Q9HAF1 191 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms