RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NAP1L5Q96NT1 182 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 AMDHD1Q96NU7 426 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 DUX3Q96PT4 197 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 NAA11Q9BSU3 229 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 OR11A1Q9GZK7 315 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PRSS22Q9GZN4 317 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 RRAGDQ9NQL2 400 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-206ENST00000471968 PPP1R3CQ9UQK1 317 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 HDGFL3Q9Y3E1 203 aa5.28□□□□□ -1.56
HDAC3-206ENST00000471968 TRIM64CA6NLI5 447 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 SEC14L6B5MCN3 397 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 GTPBP1O00178 669 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 AP3B1O00203 1094 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ETV2O00321 342 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 UPK1AO00322 258 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 EIF1BO60739 113 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 CD55P08174 381 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ADH4P08319 380 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 FASP25445 335 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 PAX6P26367 422 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 IVDP26440 423 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 GABRB3P28472 473 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 MYCNOSP40205 109 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 SESN3P58005 492 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 RAB1AP62820 205 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 SLC35A1P78382 337 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 MFGE8Q08431 387 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 PMS2P3Q13401 168 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 CBFBQ13951 182 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 LRRC75BQ2VPJ9 315 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 CEACAM16Q2WEN9 425 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 HSP90AA5PQ58FG0 334 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM255AQ5JRV8 349 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 RNLSQ5VYX0 342 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 NOXRED1Q6NXP6 359 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 LYPD2Q6UXB3 125 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF841Q6ZN19 808 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 LIAT1Q6ZQX7 453 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 C8orf86Q6ZUL3 223 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 PAGE2Q7Z2X7 111 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 MTERF4Q7Z6M4 381 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ADAMTSL2Q86TH1 951 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 OR5W2Q8NH69 310 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 CALML6Q8TD86 181 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ITLN1Q8WWA0 313 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 TM4SF18Q96CE8 201 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 P2RX4Q99571 388 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 FAM110AQ9BQ89 295 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 FAIM2Q9BWQ8 316 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 MRPL1Q9BYD6 325 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 TSGA10Q9BZW7 698 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 MSL2Q9HCI7 577 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 RETNQ9HD89 108 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 DDX18Q9NVP1 670 aaKnown RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ADPRHL2Q9NX46 363 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 GRHL1Q9NZI5 618 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 TMEM181Q9P2C4 612 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 ZDHHC8Q9ULC8 765 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 C19orf53Q9UNZ5 99 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 PCDHGA11Q9Y5H2 935 aa5.27□□□□□ -1.57
HDAC3-206ENST00000471968 SPIN1Q9Y657 262 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-206ENST00000471968 FAT1Q14517 4588 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 SORL1Q92673 2214 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 ZCWPW2A0A1B0GU75 182 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 A0A1B0GVI7 797 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CCDC189A1A4V9 331 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 LRRC10BA6NIK2 292 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 NUDT19A8MXV4 375 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 J3QL48 77 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 AP4M1O00189 453 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 SEMA3DO95025 777 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 PSMG1O95456 288 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 ALDOBP05062 364 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CCDC175P0C221 793 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 IMPDH2P12268 514 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CCNA2P20248 432 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 TACR3P29371 465 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 PTPN7P35236 360 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 MPV17P39210 176 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 TERF1P54274 439 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CDH13P55290 713 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 DLX1P56177 255 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 TAS2R39P59534 338 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 GUCA2AQ02747 115 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 KLRD1Q13241 179 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CAMK2DQ13557 499 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CNN3Q15417 329 aaKnown RBP5.26□□□□□ -1.57
HDAC3-206ENST00000471968 ZNF404Q494X3 552 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 SPATA46Q5T0L3 261 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 CCNJQ5T5M9 372 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 C10orf99Q6UWK7 81 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 C18orf65Q6ZTR6 163 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 RNF130Q86XS8 419 aa5.26□□□□□ -1.57
HDAC3-206ENST00000471968 VRK2Q86Y07 508 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms