RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IRGMA1A4Y4 181 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 FABP12A6NFH5 140 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 A8MT66 165 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 A8MUA0 341 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MPTX1A8MV57 137 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TEX46H3BTG2 121 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SGK494L7N484 410 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SULT1C2O00338 296 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC33A1O00400 549 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 AZIN1O14977 448 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OGTO15294 1046 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 ADAM12O43184 909 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 LYRM1O43325 122 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRKYO43930 277 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 KIAA0513O60268 411 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC19A2O60779 497 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 EML2O95834 649 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 LGI1O95970 557 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MOCS2O96007 188 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MT-ND1P03886 318 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL6P05231 212 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 FABP1P07148 127 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC35E2BP0CK96 405 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRSS56P0CW18 603 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB4AP20338 218 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PVALBP20472 110 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MAGP20916 626 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 LCN1P31025 176 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDKN1AP38936 164 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CD79BP40259 229 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 FRKP42685 505 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MAP2K4P45985 399 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GLIPR1P48060 266 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TGM4P49221 684 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RGS6P49758 472 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 POLR2JP52435 117 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 ARHGDIBP52566 201 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDC42P60953 191 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB5BP61020 215 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNRPD2P62316 118 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 HERVK_113P63132 956 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 ERVK-8P63133 956 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL1RL1Q01638 556 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 EMX2Q04743 252 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL10RBQ08334 325 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAPSNQ13702 412 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CAPRIN1Q14444 709 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 DPYSL2Q16555 572 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PPP1R3AQ16821 1122 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MICAQ29983 383 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPR33Q49SQ1 333 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GTDC1Q4AE62 458 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PTPN20Q4JDL3 420 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TEX30Q5JUR7 227 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MLIPQ5VWP3 458 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PYHIN1Q6K0P9 492 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC27A4Q6P1M0 643 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 C3orf33Q6P1S2 294 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MEX3BQ6ZN04 569 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM135Q86UB9 458 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 NAXDQ8IW45 347 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CNTN4Q8IWV2 1026 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SKA3Q8IX90 412 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 DAW1Q8N136 415 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 KLHDC1Q8N7A1 406 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 COLGALT1Q8NBJ5 622 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM161BQ8NDZ6 487 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GMCL1P1Q8NEA9 526 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4F6Q8NGB9 312 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4M1Q8NGD0 313 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR52H1Q8NGJ2 320 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4A15Q8NGL6 344 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR6M1Q8NGM8 313 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR9I1Q8NGQ6 314 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4C3Q8NH37 302 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPR151Q8TDV0 419 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GANCQ8TET4 914 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 METTL21AQ8WXB1 218 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SUSD6Q92537 303 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 DYRK2Q92630 601 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAD51AP1Q96B01 352 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PDLIM5Q96HC4 596 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 DIRAS2Q96HU8 199 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 C4orf45Q96LM5 186 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 TBCDQ9BTW9 1192 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNRNP25Q9BV90 132 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 ERVK-6Q9BXR3 956 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 BEX2Q9BXY8 128 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 GABARAPL3Q9BY60 117 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 NXF3Q9H4D5 531 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 SDF2L1Q9HCN8 221 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 EXOSC4Q9NPD3 245 aaKnown RBP3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL1RAPQ9NPH3 570 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 CISHQ9NSE2 258 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 PLCXD1Q9NUJ7 323 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 EXD2Q9NVH0 621 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 AIG1Q9NVV5 245 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR6C2Q9NZP2 312 aa3.89□□□□□ -1.79
HMGB1P16-201ENST00000447155 MED11Q9P086 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms