RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MS4A18H0YCH9 400 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 SEC14L2O76054 403 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 HPRP00739 348 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 NR4A2P43354 598 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 GZMKP49863 264 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 POU3F1Q03052 451 aaPredicted RBP18.25■□□□□ 0.51
VSX1-206ENST00000444511 HGFACQ04756 655 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 PMS2P3Q13401 168 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 ADRM1Q16186 407 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 MS4A18Q3C1V0 323 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 MYPOPQ86VE0 399 aaPredicted RBP18.25■□□□□ 0.51
VSX1-206ENST00000444511 SCAIQ8N9R8 606 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 SLC41A3Q96GZ6 507 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 CPPED1Q9BRF8 314 aaPredicted RBP18.25■□□□□ 0.51
VSX1-206ENST00000444511 EMC6Q9BV81 110 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 ZNF442Q9H7R0 627 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 B3GAT2Q9NPZ5 323 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 FBXO9Q9UK97 447 aaPredicted RBP18.25■□□□□ 0.51
VSX1-206ENST00000444511 USP22Q9UPT9 525 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 COL6A5A8TX70 2615 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 LOC390937A0A1W2PQ73 354 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 BGLAPP02818 100 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 HLA-DOBP13765 273 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 NPR2P20594 1047 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 THBS4P35443 961 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 PPOXP50336 477 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 CDH12P55289 794 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 DLEU7Q6UYE1 221 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 MDP1Q86V88 176 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 C20orf196Q8IYI0 205 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 SMYD1Q8NB12 490 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 ANKRD27Q96NW4 1050 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 FOXN4Q96NZ1 517 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 RAB1BQ9H0U4 201 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 LPAR3Q9UBY5 353 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 LEF1Q9UJU2 399 aaPredicted RBP18.24■□□□□ 0.51
VSX1-206ENST00000444511 NOX1Q9Y5S8 564 aa18.24■□□□□ 0.51
VSX1-206ENST00000444511 IGHV2OR16-5A0A0B4J2B6 119 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 ZNF503-AS2A6NEH8 195 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 hCG_2039718K7EN88 272 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 TPST2O60704 377 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 MFN2O95140 757 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 ERCC1P07992 297 aaPredicted RBP18.23■□□□□ 0.51
VSX1-206ENST00000444511 PUDPQ08623 228 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 CYP51A1Q16850 503 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 IQCCQ4KMZ1 466 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 RUNDC3AQ59EK9 446 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 TTMPQ5BVD1 217 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 PHYHD1Q5SRE7 291 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
VSX1-206ENST00000444511 SPATA21Q7Z572 469 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 DHDDSQ86SQ9 333 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 C11orf65Q8NCR3 313 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 IL17RDQ8NFM7 739 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 LRR1Q96L50 414 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 MOGAT1Q96PD6 335 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 MCHR1Q99705 422 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 WFDC6Q9BQY6 131 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 TMEM43Q9BTV4 400 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 REPIN1Q9BWE0 567 aaKnown RBP18.23■□□□□ 0.51
VSX1-206ENST00000444511 SHARPINQ9H0F6 387 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 INTS9Q9NV88 658 aaKnown RBP18.23■□□□□ 0.51
VSX1-206ENST00000444511 MED29Q9NX70 200 aa18.23■□□□□ 0.51
VSX1-206ENST00000444511 MRPL39Q9NYK5 338 aaKnown RBP18.23■□□□□ 0.51
VSX1-206ENST00000444511 SLC35F4A4IF30 521 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 ZNF726A6NNF4 738 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 LMX1BO60663 402 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 SERPINI2O75830 405 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 APEHP13798 732 aaKnown RBP18.22■□□□□ 0.51
VSX1-206ENST00000444511 AHCYP23526 432 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 RBBP4Q09028 425 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 SVOPLQ8N434 492 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 ZNF540Q8NDQ6 660 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 OR6N1Q8NGY5 312 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 TMEM158Q8WZ71 300 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 TXNDC15Q96J42 360 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 KCNS2Q9ULS6 477 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 POFUT2Q9Y2G5 429 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 NDUFAF1Q9Y375 327 aa18.22■□□□□ 0.51
VSX1-206ENST00000444511 IGHV4-61A0A0C4DH41 118 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 LOC100289279A0A1B0GTE1 492 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 LRRN3E7EW58 273 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 M0R3H8 397 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 ANGPT2O15123 496 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 FMO6PO60774 539 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 HLA-HP01893 362 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 OPN1SWP03999 348 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 CD79AP11912 226 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 PCBP3P57721 371 aaKnown RBP18.21■□□□□ 0.51
VSX1-206ENST00000444511 SNTB2Q13425 540 aaKnown RBP18.21■□□□□ 0.51
VSX1-206ENST00000444511 CAMK2DQ13557 499 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 DAG1Q14118 895 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 GSG1Q2KHT4 349 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 FAM166AQ6J272 317 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 ZNF613Q6PF04 617 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 ZNF813Q6ZN06 617 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 SNX32Q86XE0 403 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 PTOV1Q86YD1 416 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 THOC1Q96FV9 657 aaKnown RBP18.21■□□□□ 0.51
VSX1-206ENST00000444511 ULBP2Q9BZM5 246 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms