RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ASAH2BP0C7U1 165 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 ADORA3P0DMS8 318 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 PAX1P15863 534 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 AHCYP23526 432 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 SPOCK1Q08629 439 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 KLHL24Q6TFL4 600 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 SLC46A3Q7Z3Q1 461 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 VTCN1Q7Z7D3 282 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 GPR137CQ8N3F9 429 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 LRRC17Q8N6Y2 441 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 MAGEE2Q8TD90 523 aaPredicted RBP17.77■□□□□ 0.44
GTF3A-202ENST00000419181 SMAP2Q8WU79 429 aaPredicted RBP17.77■□□□□ 0.44
GTF3A-202ENST00000419181 TMEM255BQ8WV15 326 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 TXNDC15Q96J42 360 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 EMC6Q9BV81 110 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 GPR35Q9HC97 309 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 SPAG4Q9NPE6 437 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 TAS2R5Q9NYW4 299 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 LAMP3Q9UQV4 416 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 ARL2BPQ9Y2Y0 163 aa17.77■□□□□ 0.44
GTF3A-202ENST00000419181 SLC35F4A4IF30 521 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 GSTA4O15217 222 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ARHGEF9O43307 516 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 IGF2P01344 180 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 MT-ND1P03886 318 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 SOD3P08294 240 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 UGT2B15P54855 530 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 CDH11P55287 796 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ZP4Q12836 540 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 PGGHGQ32M88 737 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 Q5PR19 223 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ANKRD16Q6P6B7 361 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 WDFY1Q8IWB7 410 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 C20orf196Q8IYI0 205 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ZNF837Q96EG3 531 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-202ENST00000419181 PERPQ96FX8 193 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 LRR1Q96L50 414 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 PRRC1Q96M27 445 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 KCTD14Q9BQ13 255 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-202ENST00000419181 CXorf56Q9H5V9 222 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 CRLF2Q9HC73 371 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ZNF701Q9NV72 531 aaPredicted RBP17.76■□□□□ 0.43
GTF3A-202ENST00000419181 CISD1Q9NZ45 108 aaKnown RBP17.76■□□□□ 0.43
GTF3A-202ENST00000419181 A4GNTQ9UNA3 340 aa17.76■□□□□ 0.43
GTF3A-202ENST00000419181 ARPC4-TTLL3A0A0A6YYG9 625 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 C11orf98E9PRG8 122 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 SERPINI2O75830 405 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 OR6A2O95222 327 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 ZNF682O95780 498 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 PTH2RP49190 550 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 RPS4XP62701 263 aaKnown RBP17.75■□□□□ 0.43
GTF3A-202ENST00000419181 ARF1P84077 181 aaKnown RBP17.75■□□□□ 0.43
GTF3A-202ENST00000419181 CEACAM16Q2WEN9 425 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 PHYHD1Q5SRE7 291 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 CARD17Q5XLA6 110 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 SLC22A25Q6T423 547 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 CBLL1Q75N03 491 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 PFN4Q8NHR9 129 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 TMEM239Q8WW34 195 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 HS6ST2Q96MM7 605 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 DLL4Q9NR61 685 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 C20orf141Q9NUB4 165 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 SNX13Q9Y5W8 968 aa17.75■□□□□ 0.43
GTF3A-202ENST00000419181 A0A096LPE4 126 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 A0A1W2PPZ6 126 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 M0R3G1 203 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 OVOL3O00110 214 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 SERPINA1P01009 418 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 IFNW1P05000 195 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 UMPSP11172 480 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 HOXB1P14653 301 aaPredicted RBP17.74■□□□□ 0.43
GTF3A-202ENST00000419181 IFNGR1P15260 489 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 UBE2NP61088 152 aaKnown RBP17.74■□□□□ 0.43
GTF3A-202ENST00000419181 ST3GAL3Q11203 375 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 PRSS57Q6UWY2 283 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 NANOGNBQ7Z5D8 188 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 GEMIN6Q8WXD5 167 aaKnown RBP17.74■□□□□ 0.43
GTF3A-202ENST00000419181 HSH2DQ96JZ2 352 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 LRRC37BQ96QE4 947 aa17.74■□□□□ 0.43
GTF3A-202ENST00000419181 ZNF726A6NNF4 738 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 ZNF99A8MXY4 864 aaPredicted RBP17.73■□□□□ 0.43
GTF3A-202ENST00000419181 E7EQL1 145 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 OR7A10O76100 309 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 HIST1H2ABP04908 130 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 NCK1P16333 377 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 PAX7P23759 505 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 BIDP55957 195 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 CAMK2DQ13557 499 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 IFI44LQ53G44 452 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 SLC35D2Q76EJ3 337 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 HIST3H2AQ7L7L0 130 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 DTX2Q86UW9 622 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 OFCC1Q8IZS5 231 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 OR6X1Q8NH79 312 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 LIPHQ8WWY8 451 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 HIST1H2ACQ93077 130 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 FAM162AQ96A26 154 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 SGTBQ96EQ0 304 aa17.73■□□□□ 0.43
GTF3A-202ENST00000419181 ADAD1Q96M93 576 aaKnown RBP17.73■□□□□ 0.43
GTF3A-202ENST00000419181 MAN2C1Q9NTJ4 1040 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms