RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ACOX3O15254 700 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 KIAA0513O60268 411 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR10H3O60404 316 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DPM1O60762 260 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 UGT2B11O75310 529 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ALOX12BO75342 701 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 GCM2O75603 506 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NKX2-2O95096 273 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 OXSR1O95747 527 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADAP00813 363 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 KLK3P07288 261 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 LYNP07948 512 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANXA8P13928 327 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MYF6P23409 242 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ELAVL4P26378 380 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 RORAP35398 523 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 IFNGR2P38484 337 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 GTF2A1P52655 376 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CRYBA2P53672 197 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NUP107P57740 925 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCAF7P61962 342 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCDP81605 110 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL5RAQ01344 420 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 PLCXD2Q0VAA5 305 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ST3GAL3Q11203 375 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 FOXO1Q12778 655 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL18R1Q13478 541 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 IL11RAQ14626 422 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 SF3A2Q15428 464 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NSDHLQ15738 373 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAPK11Q15759 364 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DECR1Q16698 335 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DUSP7Q16829 419 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NKAIN1Q4KMZ8 207 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 VWA2Q5GFL6 755 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MRPL2Q5T653 305 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 PWWP2BQ6NUJ5 590 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TTC33Q6PID6 262 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DHRS4L2Q6PKH6 230 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TBPL2Q6SJ96 375 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ISLR2Q6UXK2 745 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 DGAT2L6Q6ZPD8 337 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 RRM2BQ7LG56 351 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ARHGAP22Q7Z5H3 698 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM179BQ7Z7N9 219 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF786Q8N393 782 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 LINC00471Q8N535 108 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMCO5AQ8N6Q1 288 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 AQP11Q8NBQ7 271 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 GPR32P1Q8NGA4 272 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR9Q2Q8NGE9 314 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR52J3Q8NH60 311 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MR1Q95460 341 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC38A4Q969I6 547 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 C7orf34Q96L11 122 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 SDF2Q99470 211 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 LPAR4Q99677 370 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MCHR1Q99705 422 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CMKLR1Q99788 373 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ARHGDIGQ99819 225 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CTRCQ99895 268 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 APOL4Q9BPW4 351 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRD60Q9BZ19 345 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ULBP3Q9BZM4 244 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF350Q9GZX5 532 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 EVA1AQ9H8M9 152 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MTHFD2LQ9H903 347 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 POLR1BQ9H9Y6 1135 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NMNAT1Q9HAN9 279 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 APMAPQ9HDC9 416 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 VCX3AQ9NNX9 186 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 BATF3Q9NR55 127 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CTPS2Q9NRF8 586 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 POLE3Q9NRF9 147 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC39A1Q9NY26 324 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDP2Q9P2J9 529 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 RHCGQ9UBD6 479 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 RPS6KB2Q9UBS0 482 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 CTSFQ9UBX1 484 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF639Q9UID6 485 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 NXT1Q9UKK6 140 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 BLOC1S6Q9UL45 172 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 LOXL2Q9Y4K0 774 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM184BQ9Y519 407 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 GMPPBQ9Y5P6 360 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAGED1Q9Y5V3 778 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 KCNE3Q9Y6H6 103 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 FER1L5A0AVI2 2057 aa3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 RANBP2P49792 3224 aaKnown RBP3.43□□□□□ -1.86
HMGB3P20-201ENST00000417997 SZT2Q5T011 3432 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGKV3D-11A0A0A0MRZ8 115 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRBV11-1A0A0K0K1C0 115 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 LOC100130705A0A1B0GUX0 176 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 C2orf92A0A1B0GVN3 265 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ARRDC5A6NEK1 342 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FRG2CA6NGY1 282 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR6C76A6NM76 312 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms