RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 C1QBP02746 253 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 TACR3P29371 465 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 NTSR1P30989 418 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 MTCP1P56278 107 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ACSM1Q08AH1 577 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ALKBH1Q13686 389 aaKnown RBP11.15□□□□□ -0.62
UBR4-205ENST00000417040 FAM74A1Q5RGS3 127 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 PAQR9Q6ZVX9 377 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 TMEM179BQ7Z7N9 219 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 TM4SF18Q96CE8 201 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ERVMER34-1Q9H9K5 563 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ZNF286AQ9HBT8 521 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 CSAG2Q9Y5P2 127 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 TMEM212A6NML5 194 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 H7C1Q1 480 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 APBB3O95704 486 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 IL22RA1Q8N6P7 574 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 OR52I2Q8NH67 350 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 METTL9Q9H1A3 318 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 OR52A5Q9H2C5 316 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 HIF1ANQ9NWT6 349 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ACHEP22303 614 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 MMP11P24347 488 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
UBR4-205ENST00000417040 OR2B8PP59922 312 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 PMPCAQ10713 525 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 DLEU7Q6UYE1 221 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
UBR4-205ENST00000417040 BANF2Q9H503 90 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 EXOSC3Q9NQT5 275 aaKnown RBP11.15□□□□□ -0.62
UBR4-205ENST00000417040 ACOXLQ9NUZ1 547 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 DNAJB11Q9UBS4 358 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 CAMK2AQ9UQM7 478 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 A0A087WV62 115 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 A0A087WZY1 265 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 PRSS38A1L453 326 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 AKR1C3P42330 323 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 ELLP55199 621 aaPredicted RBP11.15□□□□□ -0.63
UBR4-205ENST00000417040 CLDN17P56750 224 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 GLYR1Q49A26 553 aaPredicted RBP11.15□□□□□ -0.63
UBR4-205ENST00000417040 TOR2AQ5JU69 321 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 BRICD5Q6PL45 260 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 HIST2H3AQ71DI3 136 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 BTLAQ7Z6A9 289 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 TMEM99Q8N816 258 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 ADAMTS18Q8TE60 1221 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 TMEM59Q9BXS4 323 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 TNFRSF12AQ9NP84 129 aa11.15□□□□□ -0.63
UBR4-205ENST00000417040 LRIT2A6NDA9 550 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TRAPPC2LH3BP13 241 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 CYTIPO60759 359 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR7C1O76099 320 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 CR2P20023 1033 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 SOX18P35713 384 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TLE4Q04727 773 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 C4orf17Q53FE4 359 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 SOHLH1Q5JUK2 328 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TMEM31Q5JXX7 168 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PGAP1Q75T13 922 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PLXDC1Q8IUK5 500 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 BADQ92934 168 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PIGTQ969N2 578 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 FAM3DQ96BQ1 224 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 ADAM19Q9H013 955 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 GLIPR2Q9H4G4 154 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PCDHGA5Q9Y5G8 931 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 FITM1A5D6W6 292 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PTAFRP25105 342 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 CD276Q5ZPR3 534 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 LRRC56Q8IYG6 542 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR52B4Q8NGK2 314 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 LPAR4Q99677 370 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 LMF2Q9BU23 707 aaKnown RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 ANKRD12Q6UB98 2062 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PRSS44E7EML9 344 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR2T7P0C7T2 308 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 RABIFP47224 123 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 IKZF1Q13422 519 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 Q499Y3 187 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 ZNF808Q8N4W9 903 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR2T27Q8NH04 317 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TINAGL1Q9GZM7 467 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 TM7SF3Q9NS93 570 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 LRP6O75581 1613 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 A6NCN8 305 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 GJE1A6NN92 205 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 EDIL3O43854 480 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR2C1O95371 312 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 LGI1O95970 557 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms