RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ARIH2OSQ8N7S6 290 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 OR4K13Q8NH42 304 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 STK35Q8TDR2 534 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 DUSP19Q8WTR2 217 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ABHD17AQ96GS6 310 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 MED18Q9BUE0 208 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TXNL4BQ9NX01 149 aaKnown RBP13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TAS2R10Q9NYW0 307 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 EML6Q6ZMW3 1958 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ZC3H12DA2A288 527 aaKnown RBP13.62□□□□□ -0.23
SCAF11-204ENST00000395454 OR5H15A6NDH6 313 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TP53I11O14683 189 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 BMP4P12644 408 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 CD53P19397 219 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SDHAP31040 664 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 RPL4P36578 427 aaKnown RBP13.62□□□□□ -0.23
SCAF11-204ENST00000395454 AQP2P41181 271 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 DIO1P49895 249 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 OR1C1Q15619 314 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 COL28A1Q2UY09 1125 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 MDGA2Q7Z553 956 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 IGFN1Q86VF2 1251 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 EXD3Q8N9H8 876 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SPRYD4Q8WW59 207 aaPredicted RBP13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TMEM234Q8WY98 164 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 HAS2Q92819 552 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 OTULINQ96BN8 352 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SGCZQ96LD1 299 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 SIGLEC12Q96PQ1 595 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ALG8Q9BVK2 526 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ASPNQ9BXN1 380 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 NDEL1Q9GZM8 345 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCAF11-204ENST00000395454 OR51V1Q9H2C8 321 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 ASB6Q9NWX5 421 aa13.62□□□□□ -0.23
SCAF11-204ENST00000395454 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 TRDV1A0A1B0GX56 115 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 A8MVM7 634 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 IL1AP01583 271 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 ETV6P41212 452 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 PTGDSP41222 190 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 RPL18Q07020 188 aaKnown RBP13.61□□□□□ -0.23
SCAF11-204ENST00000395454 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 ALG10Q5BKT4 473 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 SLC25A53Q5H9E4 307 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 TMEM81Q6P7N7 255 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 IGFL2Q6UWQ7 119 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 B3GLCTQ6Y288 498 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 GPALPP1Q8IXQ4 340 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 FAM98AQ8NCA5 519 aaKnown RBP13.61□□□□□ -0.23
SCAF11-204ENST00000395454 RNF32Q9H0A6 362 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 METTL7AQ9H8H3 244 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 KLRF1Q9NZS2 232 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 CSAG2Q9Y5P2 127 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 NOX1Q9Y5S8 564 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 CHCHD2Q9Y6H1 151 aaPredicted RBP13.61□□□□□ -0.23
SCAF11-204ENST00000395454 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
SCAF11-204ENST00000395454 OR6C68A6NDL8 312 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SLC25A12O75746 678 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 NEURL1O76050 574 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 WISP1O95388 367 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 PDGFAP04085 211 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 CCL3P10147 92 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 PRKCAP17252 672 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 MSX1P28360 303 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 MAP2K6P52564 334 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 RPS25P62851 125 aaKnown RBP13.6□□□□□ -0.23
SCAF11-204ENST00000395454 ERVK-25P63136 954 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF85Q03923 595 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SGCBQ16585 318 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 LINC00303Q3SY05 128 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 GXYLT1Q4G148 440 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 FAM69AQ5T7M9 428 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 PRAMEF20Q5VT98 475 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SLC22A10Q63ZE4 541 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 BICRALQ6AI39 1079 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 GPR139Q6DWJ6 353 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 NTNG2Q96CW9 530 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 BABAM2Q9NXR7 383 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 DAPL1A0PJW8 107 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 K7EM74 188 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SUSD5O60279 629 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SPI1P17947 270 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SOX6P35712 828 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 CD97P48960 835 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 RPS7P62081 194 aaKnown RBP13.6□□□□□ -0.23
SCAF11-204ENST00000395454 LINC01590Q5TEZ4 76 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF227Q86WZ6 799 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms