RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SEC24CP53992 1094 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 EPS8Q12929 822 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 NPRL3Q12980 569 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 BEND6Q5SZJ8 279 aaPredicted RBP13.6□□□□□ -0.23
DDX55-202ENST00000354291 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
DDX55-202ENST00000354291 MRPL2Q5T653 305 aaKnown RBP13.6□□□□□ -0.23
DDX55-202ENST00000354291 GPAT4Q86UL3 456 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 OR9K2Q8NGE7 335 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 ITCHQ96J02 903 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
DDX55-202ENST00000354291 C7orf69Q9H7B7 122 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 ZNF665Q9H7R5 613 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 TPT1P8Q9HAU6 139 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 CRLF2Q9HC73 371 aa13.6□□□□□ -0.23
DDX55-202ENST00000354291 TMEM247A6NEH6 219 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 J3QLI3 93 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 AP3D1O14617 1153 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 IGKV3-15P01624 115 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 CBR1P16152 277 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 POLR2JP52435 117 aaKnown RBP13.59□□□□□ -0.23
DDX55-202ENST00000354291 MVDP53602 400 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 CRISP3P54108 245 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 MVKQ03426 396 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 AVPI1Q5T686 147 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 MIER2Q8N344 545 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 FAM169BQ8N8A8 192 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 LRRC58Q96CX6 371 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 ALKBH3Q96Q83 286 aaPredicted RBP13.59□□□□□ -0.23
DDX55-202ENST00000354291 SYT3Q9BQG1 590 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 SLITRK2Q9H156 845 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 SLC6A13Q9NSD5 602 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 ZNF232Q9UNY5 417 aa13.59□□□□□ -0.23
DDX55-202ENST00000354291 TMEM72A0PK05 275 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 CDHR4A6H8M9 788 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 DNAJC9-AS1A6NH13 148 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 AKR7A3O95154 331 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 TFPTP0C1Z6 253 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 ETFAP13804 333 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 CXCR1P25024 350 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 SELENOPP49908 381 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 DSTNP60981 165 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 COPZ1P61923 177 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 POU3F1Q03052 451 aaPredicted RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 BAMBIQ13145 260 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 MAD2L1BPQ15013 274 aaPredicted RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 LARS2Q15031 903 aaKnown RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 MAPK11Q15759 364 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 OCLNQ16625 522 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 C6orf10Q5SRN2 563 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 REP15Q6BDI9 236 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 PAQR6Q6TCH4 344 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 MAVSQ7Z434 540 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 MAGEE2Q8TD90 523 aaPredicted RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 SLC38A5Q8WUX1 472 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 DVL3Q92997 716 aaPredicted RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 OR52B2Q96RD2 323 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 NOX3Q9HBY0 568 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
DDX55-202ENST00000354291 RLIMQ9NVW2 624 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 DSPPQ9NZW4 1301 aa13.58□□□□□ -0.24
DDX55-202ENST00000354291 A0A0G2JPF8 293 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 HNRNPCL2B2RXH8 293 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 HNRNPCL3B7ZW38 293 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 CDC14BO60729 498 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 HNRNPCL1O60812 293 aaKnown RBP13.57□□□□□ -0.24
DDX55-202ENST00000354291 UPK3AO75631 287 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 BCHEP06276 602 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 GPIP06744 558 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 HNRNPCL4P0DMR1 293 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
DDX55-202ENST00000354291 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
DDX55-202ENST00000354291 EVX1P49640 407 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 MSMPQ1L6U9 139 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 WBP2NLQ6ICG8 309 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 LEG1Q6P5S2 330 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 EPGNQ6UW88 154 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 VRK2Q86Y07 508 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 ZNF317Q96PQ6 595 aaPredicted RBP13.57□□□□□ -0.24
DDX55-202ENST00000354291 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 FZR1Q9UM11 496 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 IFT52Q9Y366 437 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 USH1CQ9Y6N9 552 aa13.57□□□□□ -0.24
DDX55-202ENST00000354291 ZC3H12DA2A288 527 aaKnown RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 TGDSO95455 350 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 GKN3PP0CG01 181 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 NAT2P11245 290 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 NR4A1P22736 598 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 412.3 ms