RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CARD17Q5XLA6 110 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 ZNF704Q6ZNC4 412 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 SLC46A3Q7Z3Q1 461 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 RNF113BQ8IZP6 322 aaKnown RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 LRRC17Q8N6Y2 441 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 OR6N1Q8NGY5 312 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 ACOT11Q8WXI4 607 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 BPIFA2Q96DR5 249 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 PYURFQ96I23 114 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 MUS81Q96NY9 551 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 NDEL1Q9GZM8 345 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 PLEKHF2Q9H8W4 249 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 MED29Q9NX70 200 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 PRPF19Q9UMS4 504 aaKnown RBP16.87■□□□□ 0.29
SYNE4-202ENST00000340477 RNF115Q9Y4L5 304 aa16.87■□□□□ 0.29
SYNE4-202ENST00000340477 SLC35F4A4IF30 521 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 CLOCKO15516 846 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 UPK3AO75631 287 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 H1F0P07305 194 aaKnown RBP16.86■□□□□ 0.29
SYNE4-202ENST00000340477 HLA-DOBP13765 273 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 IFNGR1P15260 489 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 PAX7P23759 505 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 BIDP55957 195 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 SMIM11AP58511 58 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 PRPS1P60891 318 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 FGD3Q5JSP0 725 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 TMEM108Q6UXF1 575 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 RINLQ6ZS11 566 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 SLC35D2Q76EJ3 337 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 TMEM123Q8N131 208 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 LRR1Q96L50 414 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 HS3ST6Q96QI5 342 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 EMC6Q9BV81 110 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 C1orf21Q9H246 121 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 OBP2BQ9NPH6 170 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 SLC17A5Q9NRA2 495 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 C20orf141Q9NUB4 165 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 STX18Q9P2W9 335 aaKnown RBP16.86■□□□□ 0.29
SYNE4-202ENST00000340477 TMEM5Q9Y2B1 443 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 PLEKHA6Q9Y2H5 1048 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 CSMD1Q96PZ7 3565 aa16.86■□□□□ 0.29
SYNE4-202ENST00000340477 PDZD2O15018 2839 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 AKAP6Q13023 2319 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 hCG_2039718K7EN88 272 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 M0R3G1 203 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 PIP5K1CO60331 668 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 BCL10O95999 233 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 CSNK1A1P48729 337 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 DAP3P51398 398 aaKnown RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 FOXG1P55316 489 aaPredicted RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 RPL18Q07020 188 aaKnown RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 BSPH1Q075Z2 132 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 LGALS3BPQ08380 585 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 CAMK2DQ13557 499 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 TAF11Q15544 211 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 NCMAPQ5T1S8 102 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 C20orf204Q6ZNR8 217 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 OR1K1Q8NGR3 316 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 POP5Q969H6 163 aaKnown RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 PIP5K1AQ99755 562 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 ULBP2Q9BZM5 246 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 NMNAT1Q9HAN9 279 aaPredicted RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 CRLF2Q9HC73 371 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 GPR35Q9HC97 309 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 MOV10Q9HCE1 1003 aaKnown RBP16.85■□□□□ 0.29
SYNE4-202ENST00000340477 MAN2C1Q9NTJ4 1040 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 TAS2R5Q9NYW4 299 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 ACTR3BQ9P1U1 418 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 SLC25A15Q9Y619 301 aa16.85■□□□□ 0.29
SYNE4-202ENST00000340477 CCDC168Q8NDH2 2452 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 MYO9AB2RTY4 2548 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 EFCAB9A8MZ26 197 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 RPL36A-HNRNPH2H7BZ11 118 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 FFAR1O14842 300 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 FABP3P05413 133 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 ZNF83P51522 516 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 CEACAM16Q2WEN9 425 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 ANKDD1AQ495B1 522 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 ANKRD16Q6P6B7 361 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 MBOAT2Q6ZWT7 520 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 C20orf196Q8IYI0 205 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 FAM86B1Q8N7N1 296 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 OR6X1Q8NH79 312 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 LIPHQ8WWY8 451 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 ZNF566Q969W8 418 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 TXNDC15Q96J42 360 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 INIPQ9NRY2 104 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 NDUFAF4Q9P032 175 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 MGAT4BQ9UQ53 548 aa16.84■□□□□ 0.29
SYNE4-202ENST00000340477 A0A1W2PR80 420 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 A0A1W2PRQ8 180 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 M0R1B8 84 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 ENTPD5O75356 428 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 PRSS23O95084 383 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 IGHG1P01857 330 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 T-ENOLP0DO92 83 aa16.83■□□□□ 0.28
SYNE4-202ENST00000340477 LOXP28300 417 aaPredicted RBP16.83■□□□□ 0.28
SYNE4-202ENST00000340477 SLC9A3P48764 834 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms