RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CDK5Q00535 292 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ELFN2Q5R3F8 820 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NCR3LG1Q68D85 454 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR2A2Q6IF42 318 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 C1orf94Q6P1W5 598 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TRIM40Q6P9F5 258 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MEX3BQ6ZN04 569 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 FAM83HQ6ZRV2 1179 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SCN4BQ8IWT1 228 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RYBPQ8N488 228 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 JAGN1Q8N5M9 183 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 FAM160A2Q8N612 972 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ARIH2OSQ8N7S6 290 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 THAP4Q8WY91 577 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CLP1Q92989 425 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RNFT2Q96EX2 444 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZFP3Q96NJ6 502 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 PAAF1Q9BRP4 392 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CIPCQ9C0C6 399 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TRPV4Q9HBA0 871 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM27Q9HBJ8 222 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CACFD1Q9UGQ2 172 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RNF24Q9Y225 148 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ANGPT4Q9Y264 503 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TIMM10BQ9Y5J6 103 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CASTOR2A6NHX0 329 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 IDSB3KWA1 339 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 E7EQ34 232 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GOSR2O14653 212 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR10H3O60404 316 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZFPL1O95159 310 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CXCL10P02778 98 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 HLA-DPB1P04440 258 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RLN1P04808 185 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SOD3P08294 240 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 FURINP09958 794 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 LAMP1P11279 417 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 DHPSP49366 369 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 PRLHRP49683 370 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF84P51523 738 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SEC13P55735 322 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 B4GALNT1Q00973 533 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TAF10Q12962 218 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF345Q14585 488 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NKPD1Q17RQ9 610 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZXDCQ2QGD7 858 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR2G6Q5TZ20 316 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 LEMD1Q68G75 181 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 DOK6Q6PKX4 331 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 C16orf59Q7L2K0 433 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 LDB1Q86U70 411 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 POGLUT1Q8NBL1 392 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ACBD4Q8NC06 268 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR52I1Q8NGK6 324 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR4K15Q8NH41 348 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR52J3Q8NH60 311 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TERB2Q8NHR7 220 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 LKAAEAR1Q8TD35 194 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RPS4Y2Q8TD47 263 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MR1Q95460 341 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GTPBP3Q969Y2 492 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MYEOVQ96EZ4 313 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 RRNAD1Q96FB5 475 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR2M4Q96R27 311 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 DIRC2Q96SL1 478 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CNN2Q99439 309 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ADAM19Q9H013 955 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NEUROD4Q9HD90 331 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GULP1Q9UBP9 304 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GNG8Q9UK08 70 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TCFL5Q9UL49 500 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 FAM50BQ9Y247 325 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CACNA1IQ9P0X4 2223 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 A0A087WUJ7 227 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SMCO3A2RU48 225 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 C7orf77A4D0Y5 90 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NAP1L6A6NFF2 107 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TRDCB7Z8K6 153 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TSPAN6O43657 245 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR2F2O95006 317 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 IGSF6O95976 241 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SNRNP70P08621 437 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GJA4P35212 333 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MAS1LP35410 378 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 IDH3GP51553 393 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CDH11P55287 796 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF763Q0D2J5 394 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 EFEMP1Q12805 493 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR2F1Q13607 317 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 JOSD1Q15040 202 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 AWAT1Q58HT5 328 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 DCAF12L2Q5VW00 463 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 WDR88Q6ZMY6 472 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 WDR53Q7Z5U6 358 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 UBE3DQ7Z6J8 389 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 PXKQ7Z7A4 578 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms