RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 C19orf18Q8NEA5 215 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 IL17RDQ8NFM7 739 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 OR8K3Q8NH51 312 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 HAVCR2Q8TDQ0 301 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 PHYHIPQ92561 330 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 MNTQ99583 582 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC26A1Q9H2B4 701 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 APMAPQ9HDC9 416 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 RASD1Q9Y272 281 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 A0A0G2JK05 382 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR2T1O43869 369 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CER1O95813 267 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 HLA-DQB1P01920 261 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CYC1P08574 325 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 UCHL1P09936 223 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 AHCYP23526 432 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 THBS2P35442 1172 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR2B6P58173 313 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 IL11RAQ14626 422 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 P2RY14Q15391 338 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF684Q5T5D7 378 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 EEF1A1P5Q5VTE0 462 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 AKAP14Q86UN6 197 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CDC20BQ86Y33 519 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 RAB43Q86YS6 212 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TIGD4Q8IY51 512 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR6V1Q8N148 313 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CEP76Q8TAP6 659 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 HGDQ93099 445 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 UBL7Q96S82 380 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 SPSB2Q99619 263 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 PDCD1LG2Q9BQ51 273 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 WDR77Q9BQA1 342 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 SYT4Q9H2B2 425 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CCDC86Q9H6F5 360 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OCIAD1Q9NX40 245 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 EXTL2Q9UBQ6 330 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF879B4DU55 563 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 MEN1O00255 615 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 DCTN6O00399 190 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ADAM10O14672 748 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF354AO60765 605 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 ZFAND5O76080 213 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 DXOO77932 396 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 WISP1O95388 367 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 FGF5P12034 268 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 HOXD12P35452 270 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 RPL27P61353 136 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 RPS11P62280 158 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CARTPTQ16568 116 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR5M10Q6IEU7 315 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TMEM205Q6UW68 189 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TRILQ7L0X0 811 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 PM20D2Q8IYS1 436 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 YIPF7Q8N8F6 280 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 SAMD12Q8N8I0 201 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 RPS4Y2Q8TD47 263 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TTC9Q92623 222 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 OR14A2Q96R54 314 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 CYSLTR2Q9NS75 346 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 LAMP5Q9UJQ1 280 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TMEM14AQ9Y6G1 99 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
SPTLC1-201ENST00000262554 TVP23AA6NH52 213 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 NOTOA8MTQ0 251 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 PSMD9O00233 223 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 FLRT2O43155 660 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 KRT8P05787 483 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 INPP1P49441 399 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 TPTEP56180 551 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 SIGLEC14Q08ET2 396 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 HSD17B12Q53GQ0 312 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 LCN10Q6JVE6 187 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 UNQ9370/PRO34162Q6UXP9 181 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF517Q6ZMY9 492 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 PRR23CQ6ZRP0 262 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 OR6N2Q8NGY6 317 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 OR6S1Q8NH40 331 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 TRMT10AQ8TBZ6 339 aaKnown RBP11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 ZC3H10Q96K80 434 aaKnown RBP11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 INTS14Q96SY0 518 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 CTRCQ99895 268 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 OR11A1Q9GZK7 315 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 C11orf54Q9H0W9 315 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
SPTLC1-201ENST00000262554 WDR76Q9H967 626 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 384.4 ms