RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TSPAN11A1L157 253 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 OR2AT4A6NND4 320 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PRR32B1ATL7 298 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 HIST1H1CP16403 213 aaKnown RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RNF44Q7L0R7 432 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM17Q86X19 198 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 HSPA12BQ96MM6 686 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RNF215Q9Y6U7 377 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 A0A1W2PPE3 182 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 H7C1C5 153 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 CTNSO60931 367 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 AIFM1O95831 613 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 MYOGP15173 224 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 AVPR2P30518 371 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 ATP1B3P54709 279 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 AP3S2P59780 193 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 LCN6P62502 163 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 SHC2P98077 582 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 SLC9A5Q14940 896 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 OR10K2Q6IF99 312 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 STEAP2Q8NFT2 490 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 RPH3AQ9Y2J0 694 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-227ENST00000640957 IER3IP1Q9Y5U9 82 aa12.61□□□□□ -0.39
SCARB2-227ENST00000640957 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 TVP23AA6NH52 213 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 SOX1O00570 391 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF28P17035 718 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 DPP4P27487 766 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-227ENST00000640957 CAPZA1P52907 286 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 SRSF5Q13243 272 aaKnown RBP12.6□□□□□ -0.39
SCARB2-227ENST00000640957 NNATQ16517 81 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 OR1J2Q8NGS2 313 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 ZCCHC10Q8TBK6 192 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 CAMK1GQ96NX5 476 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 SLC22A7Q9Y694 548 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 V9GY05 133 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 DOCK9Q9BZ29 2069 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 DENND4AQ7Z401 1863 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 TMEM218A2RU14 115 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 SLC22A31A6NKX4 558 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 LAMP2P13473 410 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 RAG2P55895 527 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 OR1Q1Q15612 314 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 FOXRED2Q8IWF2 684 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 TRAM1L1Q8N609 369 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 PPP1R14AQ96A00 147 aa12.6□□□□□ -0.39
SCARB2-227ENST00000640957 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-227ENST00000640957 A0A0A6YYC8 382 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 I3L1I5 382 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ASGR2P07307 311 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 GP1BAP07359 652 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ADRA2CP18825 462 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 DLSTP36957 453 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ID4P47928 161 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 MRPL2Q5T653 305 aaKnown RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 OR4S1Q8NGB4 309 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TIFAQ96CG3 184 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SMIM19Q96E16 107 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SLC19A3Q9BZV2 496 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SPHK1Q9NYA1 384 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 IKZF2Q9UKS7 526 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 MKL2Q9ULH7 1088 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 OR1A2Q9Y585 309 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SNRNP200O75643 2136 aaKnown RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 A0A1B0GV50 99 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 OR52A4PA6NMU1 304 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 RPN2P04844 631 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 S100A6P06703 90 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 PPP2CBP62714 309 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 PPP2CAP67775 309 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 DECR1Q16698 335 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TRMT12Q53H54 448 aaKnown RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 KLHDC8AQ8IYD2 350 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 RASD2Q96D21 266 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 NUS1Q96E22 293 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms