RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 IGHMP01871 453 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 HPNP05981 417 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 ADRA2AP08913 450 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 SLC2A5P22732 501 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 AHCYP23526 432 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 RFC3P40938 356 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 DIO1P49895 249 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 TLE3Q04726 772 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 HYAL4Q2M3T9 481 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 WIPI1Q5MNZ9 446 aaPredicted RBP18.67■□□□□ 0.58
PNKP-203ENST00000593946 TMPPEQ6ZT21 453 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 SVOPQ8N4V2 548 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 ZFP62Q8NB50 900 aaPredicted RBP18.67■□□□□ 0.58
PNKP-203ENST00000593946 TMEM178AQ8NBL3 297 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 OTULINQ96BN8 352 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 SMAD5Q99717 465 aaKnown RBP18.67■□□□□ 0.58
PNKP-203ENST00000593946 GRHPRQ9UBQ7 328 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 CSAG2Q9Y5P2 127 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 ANKRD11Q6UB99 2663 aaPredicted RBP18.67■□□□□ 0.58
PNKP-203ENST00000593946 DNAJC13O75165 2243 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 ZNF407Q9C0G0 2248 aa18.67■□□□□ 0.58
PNKP-203ENST00000593946 AKR7A3O95154 331 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 ACVR2AP27037 513 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 GFRA1P56159 465 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 SPACA3Q8IXA5 215 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 LGALS12Q96DT0 336 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 RNFT2Q96EX2 444 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 SFXN2Q96NB2 322 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 NMNAT3Q96T66 252 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 CDCA4Q9BXL8 241 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 ZNF346Q9UL40 294 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 MGAQ8IWI9 3026 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 A0A1W2PNV4 684 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 GJE1A6NN92 205 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 M0R3G1 203 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 SULT2B1O00204 365 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 FADS2O95864 444 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 CDKN2AP42771 156 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 MAP2K4P45985 399 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 P2RY4P51582 365 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 OR2B6P58173 313 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 RAB40BQ12829 278 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 KRR1Q13601 381 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 IRF3Q14653 427 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 TBCEQ15813 527 aaPredicted RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 ZNF239Q16600 458 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 KLHL22Q53GT1 634 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 MESTQ5EB52 335 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 CCDC81Q6ZN84 652 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 MEPCEQ7L2J0 689 aaKnown RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 TMEM251Q8N6I4 163 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 FAR1Q8WVX9 515 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 KISS1RQ969F8 398 aaPredicted RBP18.66■□□□□ 0.58
PNKP-203ENST00000593946 TMIGD2Q96BF3 282 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 NMNAT2Q9BZQ4 307 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 TXNIPQ9H3M7 391 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 ACOT13Q9NPJ3 140 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 COMMD3-BMI1R4GMX3 469 aa18.66■□□□□ 0.58
PNKP-203ENST00000593946 OR6C68A6NDL8 312 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 CCDC182A6NF36 153 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 NPIPB13A6NJU9 1138 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 NPIPB4C9JG80 1138 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 CLUP10909 449 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 EIF2S3P41091 472 aaKnown RBP18.65■□□□□ 0.58
PNKP-203ENST00000593946 RPL27P61353 136 aaKnown RBP18.65■□□□□ 0.58
PNKP-203ENST00000593946 SLC35A1P78382 337 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 PLGLB1Q02325 96 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 TMED1Q13445 227 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 ACKR1Q16570 336 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 GTF2IRD2BQ6EKJ0 949 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 GTF2IRD2Q86UP8 949 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 JAZF1Q86VZ6 243 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 ARIH2OSQ8N7S6 290 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 TMEM99Q8N816 258 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 OR52I1Q8NGK6 324 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 ZNF519Q8TB69 540 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 ZPLD1Q8TCW7 415 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 SMPDL3BQ92485 455 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 MUL1Q969V5 352 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 TMEM80Q96HE8 168 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 KLHL15Q96M94 604 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 FGF20Q9NP95 211 aaPredicted RBP18.65■□□□□ 0.58
PNKP-203ENST00000593946 WARS2Q9UGM6 360 aaKnown RBP18.65■□□□□ 0.58
PNKP-203ENST00000593946 LAMA5O15230 3695 aa18.65■□□□□ 0.58
PNKP-203ENST00000593946 A0A0J9YW62 118 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 IRGMA1A4Y4 181 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 SLC22A31A6NKX4 558 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 FAM166BA8MTA8 275 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 LINC01387J3KSC0 135 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 SERPINI2O75830 405 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 PLGP00747 810 aaPredicted RBP18.64■□□□□ 0.57
PNKP-203ENST00000593946 HLA-DOBP13765 273 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 MAGEA5P43359 124 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 DBPQ10586 325 aaPredicted RBP18.64■□□□□ 0.57
PNKP-203ENST00000593946 LEG1Q6P5S2 330 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 PAQR6Q6TCH4 344 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.64■□□□□ 0.57
PNKP-203ENST00000593946 PXKQ7Z7A4 578 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 KDM8Q8N371 416 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 TEAD3Q99594 435 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms