RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TMPRSS11AQ6ZMR5 421 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 LINC00299Q6ZSB3 139 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SSX6Q7RTT6 188 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SPACA9Q96E40 222 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 DCLRE1CQ96SD1 692 aaKnown RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 EDEM2Q9BV94 578 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 NXF2Q9GZY0 626 aaKnown RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 METTL7AQ9H8H3 244 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 PLSCR3Q9NRY6 295 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SIRT4Q9Y6E7 314 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 FAM171A2A8MVW0 826 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SHISA8B8ZZ34 492 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 NAA10P41227 235 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 PON3Q15166 354 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 EXT1Q16394 746 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 FAM69AQ5T7M9 428 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SLC38A6Q8IZM9 456 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ATP6V1C2Q8NEY4 427 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SUN5Q8TC36 379 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TMEM234Q8WY98 164 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TSSK2Q96PF2 358 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TMED9Q9BVK6 235 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TTTY10Q9BZA0 68 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 MMP27Q9H306 513 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF160Q9HCG1 818 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 RPRD1BQ9NQG5 326 aaKnown RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 INPP5EQ9NRR6 644 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 BABAM2Q9NXR7 383 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF346Q9UL40 294 aaKnown RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 PADI1Q9ULC6 663 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 E9PI62 339 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 C11orf98E9PRG8 122 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 H7C1C5 153 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 JMJD7P0C870 316 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 APEHP13798 732 aaKnown RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CASP3P42574 277 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 HTR3AP46098 478 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 DIO1P49895 249 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SUMO3P55854 103 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 LCN6P62502 163 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 POU4F2Q12837 409 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 GGTLC2Q14390 218 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 INSL4Q14641 139 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 MESTQ5EB52 335 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 STEAP3Q658P3 488 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 C6orf15Q6UXA7 325 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 JAZF1Q86VZ6 243 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 OR6K6Q8NGW6 343 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 M1APQ8TC57 530 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 ST8SIA1Q92185 356 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 C4orf36Q96KX1 117 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CNN2Q99439 309 aaKnown RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 BARHL1Q9BZE3 327 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SLC6A5Q9Y345 797 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 WIF1Q9Y5W5 379 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CHCHD2Q9Y6H1 151 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 NSG1A0A0A6YYJ2 146 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 C9orf172C9J069 976 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SLC30A4O14863 429 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SELENOFO60613 162 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TXNDC12O95881 172 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 MT-ATP6P00846 226 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TCN2P20062 427 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 IL11P20809 199 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 GRPRP30550 384 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 PYCR1P32322 319 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TGM4P49221 684 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 OR12D2P58182 307 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SPEM2Q0P670 501 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 FOXF1Q12946 379 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 KIF26BQ2KJY2 2108 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CDCP2Q5VXM1 449 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CD200R1LQ6Q8B3 271 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 IL20RBQ6UXL0 311 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SYT14Q8NB59 555 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 OR5J2Q8NH18 312 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 STK35Q8TDR2 534 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 CT55Q8WUE5 264 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TAAR9Q96RI9 348 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 KCNS3Q9BQ31 491 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TTYH2Q9BSA4 534 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 TMEM9BQ9NQ34 198 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SNTG1Q9NSN8 517 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 J3QLW9 94 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 DCTN6O00399 190 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 MAGEB4O15481 346 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 ICMTO60725 284 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 PLGP00747 810 aaPredicted RBP8.5□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF19P17023 458 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 AHCYP23526 432 aa8.5□□□□□ -1.05
LINC00838-201ENST00000562956 SOX6P35712 828 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms