RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 FOXH1O75593 365 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SPAG6O75602 509 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 RAD51DO75771 328 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 STATHP02808 62 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 HLA-DQB2P05538 268 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 FCGR3AP08637 254 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 C8orf89P0DMQ9 161 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 UCHL3P15374 230 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CDH5P33151 784 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SERPINB6P35237 376 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CD86P42081 329 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SSR1P43307 286 aaKnown RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NSFP46459 744 aaKnown RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 KCNK10P57789 538 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 RAD51Q06609 339 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ENPEPQ07075 957 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ELP6Q0PNE2 266 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF235Q14590 738 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 P2RY14Q15391 338 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SYCP1Q15431 976 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 OR1C1Q15619 314 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 PPP1R3AQ16821 1122 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CNPY1Q3B7I2 92 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD20A4Q4UJ75 823 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 PYCR3Q53H96 274 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD20A8PQ5CZ79 823 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD20A2Q5SQ80 823 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD20A1Q5TYW2 823 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 LRRC38Q5VT99 294 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD20A3Q5VUR7 823 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ARMC3Q5W041 872 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 DCUN1D2Q6PH85 259 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ABRAXAS1Q6UWZ7 409 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NT5DC3Q86UY8 548 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 C17orf64Q86WR6 236 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SIAH3Q8IW03 269 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 PRSS58Q8IYP2 241 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 GPR137CQ8N3F9 429 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ATPAF2Q8N5M1 289 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CCDC112Q8NEF3 446 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 FDCSPQ8NFU4 85 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 OR4D9Q8NGE8 314 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 GOT1L1Q8NHS2 421 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NRGNQ92686 78 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NT5C3BQ969T7 300 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 RAB7BQ96AH8 199 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ISG20Q96AZ6 181 aaKnown RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 HAUS1Q96CS2 278 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 AP2M1Q96CW1 435 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 C16orf58Q96GQ5 468 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 DHTKD1Q96HY7 919 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CNDP1Q96KN2 507 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 C9orf72Q96LT7 481 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TECTBQ96PL2 329 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 GSDMAQ96QA5 445 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 S1PR3Q99500 378 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF184Q99676 751 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TUBGCP2Q9BSJ2 902 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NTMT1Q9BV86 223 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TRIM62Q9BVG3 475 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ST6GALNAC5Q9BVH7 336 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 DDA1Q9BW61 102 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SPATA16Q9BXB7 569 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF350Q9GZX5 532 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 FAM96AQ9H5X1 160 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 XKR8Q9H6D3 395 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 LRRC19Q9H756 370 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SLC25A19Q9HC21 320 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 IMP3Q9NV31 184 aaKnown RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SOHLH2Q9NX45 425 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TAS2R16Q9NYV7 291 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ATXN10Q9UBB4 475 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 RWDD2AQ9UIY3 292 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 SLC17A4Q9Y2C5 497 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 FBN2P35556 2912 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD36A6QL64 1941 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TNRC6AQ8NDV7 1962 aaKnown RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 AHCTF1Q8WYP5 2266 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 LRP4O75096 1905 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 KNTC1P50748 2209 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 ZFHX3Q15911 3703 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 IGHV5-51A0A0C4DH38 117 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 C1orf232A0A0U1RR37 186 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 FAM231BA6NCW3 169 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 ARHGAP42A6NI28 874 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 OR2AG2A6NM03 316 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 RNF212BA8MTL3 300 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 MKRN2OSH3BPM6 223 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 TMX2-CTNND1H3BSU7 103 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 C19orf84I3L1E1 186 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 KCNK1O00180 336 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 UGT1A9O60656 530 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 SCRG1O75711 98 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 IGLV1-47P01700 117 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 IVLP07476 585 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 CHRNGP07510 517 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 UGT1A6P19224 532 aa2.17□□□□□ -2.06
SCFD1-219ENST00000556413 CD82P27701 267 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms