RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 IGHG3P01860 377 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 RFPL3SP0C7P2 107 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GP1BBP13224 206 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PRG2P13727 222 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 RHCEP18577 417 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CHMP24386 653 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GDF1P27539 372 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SLC7A1P30825 629 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 RBM34P42696 430 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CLK1P49759 484 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CCR4P51679 360 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 POLR2HP52434 150 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SMIM11AP58511 58 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CHRNB3Q05901 458 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PIN1Q13526 163 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CCNIQ14094 377 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SLC10A1Q14973 349 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 QPRTQ15274 297 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NPTX1Q15818 432 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 BCL2A1Q16548 175 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PLPPR5Q32ZL2 321 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NDUFAF6Q330K2 333 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GLIPR1L2Q4G1C9 344 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 KRTCAP3Q53RY4 240 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NHSL2Q5HYW2 709 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF324BQ6AW86 544 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 OR5M10Q6IEU7 315 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 AAGABQ6PD74 315 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ENPP6Q6UWR7 440 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 C5orf46Q6UWT4 87 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF771Q7L3S4 317 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GRINAQ7Z429 371 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 VTCN1Q7Z7D3 282 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 HMGN2P46Q86SG4 172 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 GLCCI1Q86VQ1 547 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 COMTD1Q86VU5 262 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SPATA24Q86W54 205 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SIAH3Q8IW03 269 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TMEM251Q8N6I4 163 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 FAM86B1Q8N7N1 296 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 OR6T1Q8NGN1 323 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PHF10Q8WUB8 498 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 RFKQ969G6 155 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SLC47A1Q96FL8 570 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SH3YL1Q96HL8 342 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 RSRC1Q96IZ7 334 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 MPP4Q96JB8 637 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 C7orf34Q96L11 122 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PRRC1Q96M27 445 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 JSRP1Q96MG2 331 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TAAR6Q96RI8 345 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PIP5K1AQ99755 562 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 PIGQQ9BRB3 760 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ALG8Q9BVK2 526 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SLC19A3Q9BZV2 496 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 TMEM27Q9HBJ8 222 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 AGPAT4Q9NRZ5 378 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ARMC1Q9NVT9 282 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SELENONQ9NZV5 590 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NDUFAF4Q9P032 175 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 MED11Q9P086 117 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 DKKL1Q9UK85 242 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 FBXL2Q9UKC9 423 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 ACAD8Q9UKU7 415 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 FAM32AQ9Y421 112 aaKnown RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 SPIN1Q9Y657 262 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 DOCK10Q96BY6 2186 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 MED13Q9UHV7 2174 aa5.16□□□□□ -1.58
SCAF11-213ENST00000550629 NUP214P35658 2090 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-213ENST00000550629 CHD6Q8TD26 2715 aa5.15□□□□□ -1.58
SCAF11-213ENST00000550629 A0A0B4J2E0 115 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 A0A1B0GWA3 101 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 A0A1B0GX12 115 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 A0A1W2PRQ8 180 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 C17orf51A8MQB3 221 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 FAM166BA8MTA8 275 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 M0R3H8 397 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ADAMDEC1O15204 470 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF208O43345 1280 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 HNRNPRO43390 633 aaKnown RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 DNPH1O43598 174 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 CHP2O43745 196 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 TPST2O60704 377 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 RBMXL2O75526 392 aaKnown RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 TRAPPC6AO75865 159 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 KRT36O76013 467 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 IGF2P01344 180 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 FABP3P05413 133 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 GKN3PP0CG01 181 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 FCGR1AP12314 374 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 MST1P26927 711 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 HTR2AP28223 471 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 RYKP34925 604 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 MAGEA5P43359 124 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 OR1E2P47887 323 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 IDH2P48735 452 aaKnown RBP5.15□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF134P52741 427 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 PROK1P58294 105 aa5.15□□□□□ -1.59
SCAF11-213ENST00000550629 B3GALT5-AS1P59052 145 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms