RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 NRG4Q8WWG1 115 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 STMN2Q93045 179 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 VKORC1Q9BQB6 163 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 BDH2Q9BUT1 245 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 PLA2G12AQ9BZM1 189 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 SMURF2Q9HAU4 748 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 BCO1Q9HAY6 547 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 Q9UFV3 132 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 SH3BGRL2Q9UJC5 107 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 TMCC3Q9ULS5 477 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 CORINQ9Y5Q5 1042 aa9.5□□□□□ -0.89
NPIPB3-210ENST00000542817 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 ARHGAP21Q5T5U3 1957 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 USP9YO00507 2555 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TRGV8A0A0C4DH27 118 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 SAC3D1A6NKF1 404 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 G3V2T6 193 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 DLGAP1O14490 977 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 GNGT2O14610 69 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 EIF1BO60739 113 aaKnown RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 MITFO75030 526 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF432O94892 652 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 CGAP01215 116 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 PLA2G2AP14555 144 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 PMPCAQ10713 525 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 MFSD13AQ14CX5 517 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 KDM4DQ6B0I6 523 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 KLHL17Q6TDP4 642 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF620Q6ZNG0 422 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 CREB3L2Q70SY1 520 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 MAMDC2Q7Z304 686 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 LIX1LQ8IVB5 337 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TUSC5Q8IXB3 177 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 LINC00471Q8N535 108 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 OR9K2Q8NGE7 335 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 OR51A7Q8NH64 312 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 GNPDA2Q8TDQ7 276 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF775Q96BV0 537 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TXNDC15Q96J42 360 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF385AQ96PM9 386 aaKnown RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 CIB1Q99828 191 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 OSBPL10Q9BXB5 764 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TIGARQ9NQ88 270 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 C6orf203Q9P0P8 240 aaPredicted RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 IL20RAQ9UHF4 553 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 MCTS1Q9ULC4 181 aaKnown RBP9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 CLEC4AQ9UMR7 237 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 MGAT4BQ9UQ53 548 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 TMEM5Q9Y2B1 443 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 FLVCR1Q9Y5Y0 555 aa9.49□□□□□ -0.89
NPIPB3-210ENST00000542817 NBPF19A0A087WUL8 3843 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 UNC119BA6NIH7 251 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 ZNF724A8MTY0 619 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 MCIDASD6RGH6 385 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 SOCS2O14508 198 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 CASQ2O14958 399 aaPredicted RBP9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 LRRTM2O43300 516 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 E2F6O75461 281 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 BAG2O95816 211 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 ADAP00813 363 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 ALPLP05186 524 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 RNF224P0DH78 156 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 EPHA2P29317 976 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 AGTR1P30556 359 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC9A3P48764 834 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 RUNX1T1Q06455 604 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 PUDPQ08623 228 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 RASGEF1BQ0VAM2 473 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 PMS2P3Q13401 168 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 CNPY1Q3B7I2 92 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 ZBED5Q49AG3 693 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 RIPPLY2Q5TAB7 128 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 LPCAT4Q643R3 524 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 RASSF6Q6ZTQ3 369 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 FAM122BQ7Z309 247 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 NUFIP2Q7Z417 695 aaKnown RBP9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 PXKQ7Z7A4 578 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 OAFQ86UD1 273 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 STK32CQ86UX6 486 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 HIPK1Q86Z02 1210 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 GCNT2Q8N0V5 402 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 SLC43A2Q8N370 569 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 SVOPLQ8N434 492 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 C10orf53Q8N6V4 93 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 ICA1LQ8NDH6 482 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 INTS12Q96CB8 462 aaKnown RBP9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 STARD4Q96DR4 205 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 CCDC120Q96HB5 630 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 OXGR1Q96P68 337 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 GPX7Q96SL4 187 aaPredicted RBP9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 SF3B5Q9BWJ5 86 aaKnown RBP9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 EGLN3Q9H6Z9 239 aa9.48□□□□□ -0.89
NPIPB3-210ENST00000542817 IL20Q9NYY1 176 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms