RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 FAM198BQ6UWH4 519 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 RAB11FIP2Q7L804 512 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 CMIPQ8IY22 773 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 OTULINQ96BN8 352 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 GPR137Q96N19 417 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 MGAT4AQ9UM21 535 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 A0A1B0GVC2 190 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 A6NIN4 97 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 SNTNA6NMZ2 147 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 TSPAN2O60636 221 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF354AO60765 605 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 CH25HO95992 272 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 UBL4AP11441 157 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 MAKP20794 623 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 CDONQ4KMG0 1287 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 DCAF12Q5T6F0 453 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 GHDCQ8N2G8 530 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 POGLUT1Q8NBL1 392 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 TRIM2Q9C040 744 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 SEMA4CQ9C0C4 833 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 MED28Q9H204 178 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 EIF3KQ9UBQ5 218 aaKnown RBP13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 RPS6KB2Q9UBS0 482 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 ELF5Q9UKW6 265 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 SLC35A3Q9Y2D2 325 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 U3KQ87 197 aa13.91□□□□□ -0.18
CLPTM1-202ENST00000541297 TFPIP10646 304 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 TBXA2RP21731 343 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 FPR3P25089 353 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 IDNKQ5T6J7 187 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 FNDC7Q5VTL7 733 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 TMEM205Q6UW68 189 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 NR2C2APQ86WQ0 139 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF680Q8NEM1 530 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 TOR1AIP2Q8NFQ8 470 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 STRADBQ9C0K7 418 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 MEPEQ9NQ76 525 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ADAM30Q9UKF2 790 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ASPMQ8IZT6 3477 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 TRAV6A0A075B6T7 132 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 C9J4A7 227 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 STK17BO94768 372 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 NGFRP08138 427 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 HK1P19367 917 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ENPP1P22413 925 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 BTG1P62324 171 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ISXQ2M1V0 245 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 PLA1AQ53H76 456 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 BICRALQ6AI39 1079 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 VASNQ6EMK4 673 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 DHRS13Q6UX07 377 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 TMEM91Q6ZNR0 172 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 WDR54Q9H977 334 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ZFP64Q9NPA5 681 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ZNF222Q9UK12 451 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 ING4Q9UNL4 249 aa13.9□□□□□ -0.18
CLPTM1-202ENST00000541297 KDM4EB2RXH2 506 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 B4E171 279 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 TO15178 435 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 ZNF264O43296 627 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 KLF4O43474 513 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SLC19A2O60779 497 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 KLF7O75840 302 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 PDGFAP04085 211 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 UMODP07911 640 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 JMJD7P0C870 316 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 TSPAN7P41732 249 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 CDH11P55287 796 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SKP2Q13309 424 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SLC30A6Q6NXT4 461 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 IL20RBQ6UXL0 311 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 RASSF6Q6ZTQ3 369 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 LRRC17Q8N6Y2 441 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 OR11H7Q8NGC8 314 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 OR11H4Q8NGC9 324 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SPRYD4Q8WW59 207 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 ABCG5Q9H222 651 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 KRCC1Q9NPI7 259 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 C19orf25Q9UFG5 118 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 MED31Q9Y3C7 131 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 PRR33A8MZF0 331 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SAGP10523 405 aaPredicted RBP13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SLC26A5P58743 744 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 ZNF524Q96C55 264 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 BPIFA2Q96DR5 249 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
CLPTM1-202ENST00000541297 TBL1XR1Q9BZK7 514 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms