RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 RP2O75695 350 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 HKR1P10072 659 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 PNMTP11086 282 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 ZNF35P13682 527 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 GLRXP35754 106 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 MAGEB1P43366 347 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 FOXL1Q12952 345 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 GNA13Q14344 377 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 PHYHD1Q5SRE7 291 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 ATG16L1Q676U5 607 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 LRRC74BQ6ZQY2 392 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 VRK2Q86Y07 508 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 ANKK1Q8NFD2 765 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 RNF217Q8TC41 542 aa17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 MTHFD2LQ9H903 347 aaPredicted RBP17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 DDX28Q9NUL7 540 aaKnown RBP17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 NOP53Q9NZM5 478 aaKnown RBP17.4■□□□□ 0.38
SQSTM1-215ENST00000514093 A0A0G2JMP0 313 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 A0A0X1KG70 313 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 M0R3G1 203 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 DBIP07108 87 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 PRG2P13727 222 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 ANPEPP15144 967 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 RPS4Y1P22090 263 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 MAD2L1Q13257 205 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 TRMT5Q32P41 509 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 GKAP1Q5VSY0 366 aaPredicted RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 WBP2NLQ6ICG8 309 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 GSPT2Q8IYD1 628 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 OR4M2Q8NGB6 313 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 NANPQ8TBE9 248 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 EPS8L3Q8TE67 593 aaKnown RBP17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 DUX5Q96PT3 197 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF416Q9BWM5 594 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 B3GAT1Q9P2W7 334 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 RCE1Q9Y256 329 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 CORINQ9Y5Q5 1042 aa17.39■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF99A8MXY4 864 aaPredicted RBP17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 FTCDNL1E5RQL4 147 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 NPIPB7O75200 414 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 NR2F1P10589 423 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 RPS5P46782 204 aaKnown RBP17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 COPZ1P61923 177 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 CHI3L2Q15782 390 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 GSG1Q2KHT4 349 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 ANXA8L1Q5VT79 327 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 CARD17Q5XLA6 110 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 REP15Q6BDI9 236 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF836Q6ZNA1 936 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 IFT20Q8IY31 132 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF440Q8IYI8 595 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 VPS37AQ8NEZ2 397 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF75AQ96N20 296 aa17.38■□□□□ 0.37
SQSTM1-215ENST00000514093 A0A0G2JK05 382 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 A0A1W2PPW3 197 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 CDHR4A6H8M9 788 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 PRSS23O95084 383 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 AHSA1O95433 338 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF14P17017 642 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 NCF2P19878 526 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 AQP5P55064 265 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 MRPS11P82912 194 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 ZP4Q12836 540 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 C1DQ13901 141 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 CASP8Q14790 479 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 PDCD2Q16342 344 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 SPANXN4Q5MJ08 99 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 COX20Q5RI15 118 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 DCAF12L2Q5VW00 463 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 ZNF771Q7L3S4 317 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 CCDC36Q8IYA8 594 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 CLIP4Q8N3C7 705 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 MNS1Q8NEH6 495 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 MFSD8Q8NHS3 518 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 PNPT1Q8TCS8 783 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 C16orf45Q96MC5 204 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 OXGR1Q96P68 337 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 OR2M2Q96R28 347 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 PTDSS2Q9BVG9 487 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 ASIC5Q9NY37 505 aa17.37■□□□□ 0.37
SQSTM1-215ENST00000514093 DEAF1O75398 565 aaPredicted RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 ZFP36P26651 326 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 GTF2E2P29084 291 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 PTDSS1P48651 473 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 GALK2Q01415 458 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 MAPK11Q15759 364 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 FXNQ16595 210 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 PEX5LQ8IYB4 626 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 PIK3C3Q8NEB9 887 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 OR52P1PQ8NH57 321 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 KTI12Q96EK9 354 aaPredicted RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 C7orf69Q9H7B7 122 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 AKTIPQ9H8T0 292 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 UNKLQ9H9P5 680 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 CMYA5Q8N3K9 4069 aa17.36■□□□□ 0.37
SQSTM1-215ENST00000514093 FPR2P25090 351 aa17.35■□□□□ 0.37
SQSTM1-215ENST00000514093 CCL8P80075 99 aa17.35■□□□□ 0.37
SQSTM1-215ENST00000514093 EGR4Q05215 589 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms