RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 EFNA4P52798 201 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 CLDN17P56750 224 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 PCBP3P57721 371 aaKnown RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 SF3A3Q12874 501 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNF4-212ENST00000509258 MST1LQ2TV78 715 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 TBRG1Q3YBR2 411 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 CYB5R2Q6BCY4 276 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 TMEM225Q6GV28 225 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 CGB2Q6NT52 195 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 REEP3Q6NUK4 255 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 NIPAL3Q6P499 406 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 RBM45Q8IUH3 476 aaKnown RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 LSMEM1Q8N8F7 131 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 OR1K1Q8NGR3 316 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 ZNF417Q8TAU3 575 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 BCL2L2Q92843 193 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 SLC35B4Q969S0 331 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 MAGEB18Q96M61 343 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 MOGAT1Q96PD6 335 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 ZNF317Q96PQ6 595 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 ZNF587Q96SQ5 575 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 SHARPINQ9H0F6 387 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 RAD21L1Q9H4I0 556 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 TMEM38AQ9H6F2 299 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 NPHS2Q9NP85 383 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 MYOZ1Q9NP98 299 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 THUMPD1Q9NXG2 353 aaKnown RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 KLHL14Q9P2G3 628 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.5□□□□□ -0.89
RNF4-212ENST00000509258 USP22Q9UPT9 525 aa9.5□□□□□ -0.89
RNF4-212ENST00000509258 A0A0B4J2E0 115 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 A0A1B0GX12 115 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 C5orf58C9J3I9 102 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 MS4A18H0YCH9 400 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 NDUFS8O00217 210 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 EDF1O60869 148 aaKnown RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 SEC14L2O76054 403 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 MFN2O95140 757 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 BGLAPP02818 100 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 ZNF16P17020 682 aaPredicted RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 GTF2E2P29084 291 aaKnown RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 CALCRP30988 508 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 THBS2P35442 1172 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 GZMKP49863 264 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 PDLIM4P50479 330 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 GZMMP51124 257 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 UBE2NP61088 152 aaKnown RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
RNF4-212ENST00000509258 OR1Q1Q15612 314 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 DUSP7Q16829 419 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 MS4A18Q3C1V0 323 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 DHDDSQ86SQ9 333 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 TMEM123Q8N131 208 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 DPP10Q8N608 796 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 C10orf105Q8TEF2 133 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 DYDC1Q8WWB3 177 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 BOD1Q96IK1 185 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 ANKRD27Q96NW4 1050 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 CGREF1Q99674 301 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 ARHGDIGQ99819 225 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 PIMREGQ9BSJ6 248 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 NOX3Q9HBY0 568 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 TMEM45AQ9NWC5 275 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 MOKQ9UQ07 419 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 RASD1Q9Y272 281 aa9.49□□□□□ -0.89
RNF4-212ENST00000509258 ANK2Q01484 3957 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 ZNF587BE7ETH6 402 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 FXYD1O00168 92 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 CRYAAP02489 173 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 ERCC1P07992 297 aaPredicted RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 IGHV4-31P0DP07 118 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 HNF1AP20823 631 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 CD247P20963 164 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 USF1P22415 310 aaPredicted RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 CDH12P55289 794 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 RGS8P57771 180 aaPredicted RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
RNF4-212ENST00000509258 ARF1P84077 181 aaKnown RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 ROR2Q01974 943 aaKnown RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 ALG10BQ5I7T1 473 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 HDXQ7Z353 690 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 NET1Q7Z628 596 aaPredicted RBP9.48□□□□□ -0.89
RNF4-212ENST00000509258 ZNF540Q8NDQ6 660 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 HIPK4Q8NE63 616 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 OR6T1Q8NGN1 323 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 STON2Q8WXE9 905 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 SLC38A4Q969I6 547 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 TAMM41Q96BW9 452 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 SLC41A3Q96GZ6 507 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 TXNDC15Q96J42 360 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 OR2M2Q96R28 347 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 EMC6Q9BV81 110 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 C12orf10Q9HB07 376 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 GPR35Q9HC97 309 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 ZNF446Q9NWS9 450 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 KCNS2Q9ULS6 477 aa9.48□□□□□ -0.89
RNF4-212ENST00000509258 TRAV36DV7A0A075B6V5 113 aa9.47□□□□□ -0.89
RNF4-212ENST00000509258 A0A087WUJ7 227 aa9.47□□□□□ -0.89
RNF4-212ENST00000509258 A0A0G2JND7 137 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms