RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PNO1Q9NRX1 252 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 MED11Q9P086 117 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 CLEC4AQ9UMR7 237 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 PCDHGA6Q9Y5G7 932 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 E9PQ18 207 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 BRINP1O60477 761 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 LCN1P31025 176 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 GABRA3P34903 492 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 RAB4BP61018 213 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 OR6T1Q8NGN1 323 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 AKR7LQ8NHP1 331 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 APOBEC4Q8WW27 367 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 SLC41A2Q96JW4 573 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 CCDC74BQ96LY2 380 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 PTCHD1Q96NR3 888 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 OR2M2Q96R28 347 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 SOSTQ9BQB4 213 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 GHRLQ9UBU3 117 aa16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 C19orf53Q9UNZ5 99 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-205ENST00000489144 IGHV5-10-1A0A0J9YXX1 117 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 A0A1W2PRQ8 180 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 PEX12O00623 359 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 SIGLEC5O15389 551 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 FPR1P21462 350 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 AVPR2P30518 371 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 CD79BP40259 229 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 WDR74Q6RFH5 385 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 SLC5A8Q8N695 610 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 CLDN22Q8N7P3 220 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 GTPBP3Q969Y2 492 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 HRASLS5Q96KN8 279 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 NDC1Q9BTX1 674 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 B3GAT2Q9NPZ5 323 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 PLEKHB1Q9UF11 243 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 KIF26BQ2KJY2 2108 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 TRBV4-1A0A0J9YWV2 114 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 LY86O95711 162 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 MUC1P15941 1255 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 POU3F2P20265 443 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 MPLP40238 635 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 ECH1Q13011 328 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 TOMM20Q15388 145 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 ZNF311Q5JNZ3 666 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 CDC73Q6P1J9 531 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 TMEM71Q6P5X7 295 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 TMEM88Q6PEY1 159 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 PGAP1Q75T13 922 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 PDZD9Q8IXQ8 264 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 MOAP1Q96BY2 351 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 FEVQ99581 238 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 NIPSNAP1Q9BPW8 284 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 CHST2Q9Y4C5 530 aa16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 EP300Q09472 2414 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-205ENST00000489144 ADAMTS20P59510 1910 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 DMXL1Q9Y485 3027 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 UBE2CO00762 179 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 RBBP9O75884 186 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 CRYBA1P05813 215 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 MAPK14Q16539 360 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 PLA1AQ53H76 456 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 TCTN3Q6NUS6 607 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 FRRS1Q6ZNA5 592 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 NANOGP1Q8N7R0 232 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ZNF614Q8N883 585 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 COX18Q8N8Q8 333 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 OR1S1Q8NH92 325 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 DGAT2Q96PD7 388 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 LMF1Q96S06 567 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 SSX3Q99909 188 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 VRK1Q99986 396 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 RNF32Q9H0A6 362 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 RXFP3Q9NSD7 469 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 PTGFRNQ9P2B2 879 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 FBXO4Q9UKT5 387 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ENPP4Q9Y6X5 453 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 FITM1A5D6W6 292 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ANXA2P2A6NMY6 339 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 SLC35E2P0CK97 266 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ARHGAP40Q5TG30 622 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 METAP1DQ6UB28 335 aaPredicted RBP16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ZFP82Q8N141 532 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ZNF354BQ96LW1 612 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 ACER3Q9NUN7 267 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 FTSJ1Q9UET6 329 aa16.65■□□□□ 0.26
POLR2J3-205ENST00000489144 M0R129 80 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 GPR171O14626 319 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 CTNSO60931 367 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 CDRT1O95170 752 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 S1PR1P21453 382 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 MXD1Q05195 221 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 HNRNPA0Q13151 305 aaKnown RBP16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 ILKQ13418 452 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 ZNF57Q68EA5 555 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 CARFQ8N187 725 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 CDCA4Q9BXL8 241 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 C11orf16Q9NQ32 467 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 OCIAD1Q9NX40 245 aa16.64■□□□□ 0.25
POLR2J3-205ENST00000489144 MRPS33Q9Y291 106 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms