RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PRKCDQ05655 676 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 KDSRQ06136 332 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 SLC17A1Q14916 467 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PSMD5Q16401 504 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM44Q2T9K0 475 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PIGGQ5H8A4 983 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TEX30Q5JUR7 227 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RBM48Q5RL73 367 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ATAD3CQ5T2N8 411 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 C9orf66Q5T8R8 295 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 UBE2UQ5VVX9 321 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 GPR107Q5VW38 600 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ELP2Q6IA86 826 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PNCKQ6P2M8 343 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TTC33Q6PID6 262 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ARSKQ6UWY0 536 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM26Q6ZUK4 368 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TMUB2Q71RG4 321 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 NUFIP2Q7Z417 695 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 CTAGE3PQ8IX95 158 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 MICU2Q8IYU8 434 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PGAM4Q8N0Y7 254 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF781Q8N8C0 355 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 Q8N9G6 341 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PDCD6IPQ8WUM4 868 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 DCAKDQ8WVC6 231 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 DNAJA4Q8WW22 397 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RPL3LQ92901 407 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PPWD1Q96BP3 646 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ASB9Q96DX5 294 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 MRPL53Q96EL3 112 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 C14orf79Q96F83 325 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 GLT1D1Q96MS3 346 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TSNARE1Q96NA8 513 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RDH12Q96NR8 316 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PELOQ9BRX2 385 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ZSCAN5AQ9BUG6 496 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RPP25Q9BUL9 199 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TEKT3Q9BXF9 490 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 FRMD8P1Q9BZ68 369 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 NXF2Q9GZY0 626 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RAB33BQ9H082 229 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 GORASP2Q9H8Y8 452 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RPS10P5Q9NQ39 176 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 RGS18Q9NS28 235 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 MED9Q9NWA0 146 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 SMPD3Q9NY59 655 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PTTG3PQ9NZH4 202 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 CCDC59Q9P031 241 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ARMCX1Q9P291 453 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ENOPH1Q9UHY7 261 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TRAPPC4Q9Y296 219 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 ACOT9Q9Y305 439 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 PLLPQ9Y342 182 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 FBXO7Q9Y3I1 522 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 MMP24Q9Y5R2 645 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TNRQ92752 1358 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 TECPR2O15040 1411 aa3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 COL1A1P02452 1464 aaPredicted RBP3.08□□□□□ -1.92
ECHDC1-217ENST00000488087 LAMB4A4D0S4 1761 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 KIDINS220Q9ULH0 1771 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 A0A0X1KG70 313 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 TEX48A0A1B0GUV7 120 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 A0A1W2PRG6 482 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 PDZK1P1A8MUH7 402 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 F8W036 122 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 H0YCG3 227 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 DLGAP1O14490 977 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 ZBTB5O15062 677 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 GPAA1O43292 621 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 SPOPO43791 374 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 CALUO43852 315 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 UGT2B17O75795 530 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 SNAPC5O75971 98 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 SUPT7LO94864 414 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 SNAP29O95721 258 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 IGHG1P01857 330 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 MT-ND1P03886 318 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 OR9G9P0C7N8 305 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 RALAP11233 206 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 COX4I1P13073 169 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 PRG2P13727 222 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 BGNP21810 368 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 HLA-DMAP28067 261 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 SOX6P35712 828 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 HTR2BP41595 481 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 YAP1P46937 504 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 STARP49675 285 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 GSK3BP49841 420 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 CCL11P51671 97 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 UGT2B15P54855 530 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 PSMD4P55036 377 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 AQP5P55064 265 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 EIF3EP60228 445 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 RAB14P61106 215 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 MGAT3Q09327 533 aa3.07□□□□□ -1.92
ECHDC1-217ENST00000488087 MERTKQ12866 999 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms