RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 LSM14AQ8ND56 463 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 ZNF417Q8TAU3 575 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SMPDL3BQ92485 455 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SDCCAG3Q96C92 435 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 DTNBP1Q96EV8 351 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ZNF587Q96SQ5 575 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 SLX1AQ9BQ83 275 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TUBA1CQ9BQE3 449 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TACO1Q9BSH4 297 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 TAPBPLQ9BX59 468 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TSSK6Q9BXA6 273 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 VCX3BQ9H321 246 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 OR52D1Q9H346 318 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 KRT84Q9NSB2 600 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SMPD3Q9NY59 655 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 AASSQ9UDR5 926 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PCDHGB5Q9Y5G0 923 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 CORINQ9Y5Q5 1042 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 IER3IP1Q9Y5U9 82 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 NBEAQ8NFP9 2946 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ITPR1Q14643 2758 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 CPAMD8Q8IZJ3 1885 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 PIEZO2Q9H5I5 2752 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 IGHV3-15A0A0B4J1V0 119 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 MCIDASD6RGH6 385 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 IMPA2O14732 288 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SEC14L5O43304 696 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 DNPH1O43598 174 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CYTIPO60759 359 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 AQP8O94778 261 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 VAMP5O95183 116 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SOX14O95416 240 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SLC2A10O95528 541 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CLIC3O95833 236 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 HMGN1P05114 100 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CD14P08571 375 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ADORA3P0DMS8 318 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 AHCYP23526 432 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 POU1F1P28069 291 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 GGT2P36268 569 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CAPGP40121 348 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 EIF1AXP47813 144 aaKnown RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 MLLT10P55197 1068 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CTXN1P60606 82 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ERVK-25P63136 954 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CSNK2A1P68400 391 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 MYBPC1Q00872 1141 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 RUNX1T1Q06455 604 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CDK5R2Q13319 367 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 PDK3Q15120 406 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 C3AR1Q16581 482 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ALG10Q5BKT4 473 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SLC25A30Q5SVS4 291 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SLC35F1Q5T1Q4 408 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 PDSS1Q5T2R2 415 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ARMC4Q5T2S8 1044 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 FAM180AQ6UWF9 173 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SEM1Q6ZVN7 128 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 IGFN1Q86VF2 1251 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 DOLPP1Q86YN1 238 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SLC43A2Q8N370 569 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 FAM26EQ8N5C1 309 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ARIH2OSQ8N7S6 290 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 NPEPL1Q8NDH3 523 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ADPRHL1Q8NDY3 354 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 OR5M9Q8NGP3 310 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 FBLIM1Q8WUP2 373 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ZNRF4Q8WWF5 429 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 TRUB1Q8WWH5 349 aaKnown RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 SARAFQ96BY9 339 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 Q96M85 177 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 BBC3Q96PG8 261 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 GPX7Q96SL4 187 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 ZNF184Q99676 751 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 PITX2Q99697 317 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 NAA11Q9BSU3 229 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SF3B5Q9BWJ5 86 aaKnown RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 ASPNQ9BXN1 380 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 MRPL13Q9BYD1 178 aaKnown RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 TXNIPQ9H3M7 391 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 RIBC2Q9H4K1 309 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 EXO5Q9H790 373 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 RNF122Q9H9V4 155 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CALHM2Q9HA72 323 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 SLC25A19Q9HC21 320 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CHST11Q9NPF2 352 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 KRCC1Q9NPI7 259 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 TIGARQ9NQ88 270 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 INIPQ9NRY2 104 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 PNPLA3Q9NST1 481 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 PAQR5Q9NXK6 330 aaPredicted RBP5.3□□□□□ -1.56
USP39-213ENST00000467885 ALKBH4Q9NXW9 302 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 TVP23BQ9NYZ1 205 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 UBAP1Q9NZ09 502 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 RAB26Q9ULW5 256 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms