RNA–Protein interactions for RNA: ENST00000452814.5

RAB11FIP3-206, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 5

Gene RAB11FIP3, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-206ENST00000452814 PIK3C3Q8NEB9 887 aa13.56□□□□□ -0.24
RAB11FIP3-206ENST00000452814 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SOX7Q9BT81 388 aa13.56□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
RAB11FIP3-206ENST00000452814 A4GALTQ9NPC4 353 aa13.56□□□□□ -0.24
RAB11FIP3-206ENST00000452814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.55□□□□□ -0.246e-8■■□□□ 14.1
RAB11FIP3-206ENST00000452814 IGHV2OR16-5A0A0B4J2B6 119 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 AIM2O14862 343 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CELA3BP08861 270 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 BMP2P12643 396 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 EVX1P49640 407 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 RIN1Q13671 783 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 RGNQ15493 299 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CEP85LQ5SZL2 805 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 FAM69AQ5T7M9 428 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 H1FNTQ75WM6 255 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 MYPOPQ86VE0 399 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 TMEM123Q8N131 208 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 RFLNBQ8N5W9 214 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ADPRHL1Q8NDY3 354 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 TAAR8Q969N4 342 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 C1orf159Q96HA4 380 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 OR2M2Q96R28 347 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 RAD21L1Q9H4I0 556 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 RPS6KB2Q9UBS0 482 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 USP22Q9UPT9 525 aa13.55□□□□□ -0.24
RAB11FIP3-206ENST00000452814 LRP5LA4QPB2 252 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 HAX1O00165 279 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 LILRA1O75019 489 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 C8BP07358 591 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 KITP10721 976 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ETS2P15036 469 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 APEX1P27695 318 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 PRKAR1BP31321 381 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 POLR2JP52435 117 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 HOXC5Q00444 222 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 FADDQ13158 208 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CEACAM16Q2WEN9 425 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 C6orf10Q5SRN2 563 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SPATA21Q7Z572 469 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 MDP1Q86V88 176 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZCCHC24Q8N2G6 241 aaKnown RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ANKRD42Q8N9B4 389 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 DNAJA4Q8WW22 397 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CKAP2Q8WWK9 683 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 GTF2H4Q92759 462 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SLC38A4Q969I6 547 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF837Q96EG3 531 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 LRR1Q96L50 414 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 B3GNT2Q9NY97 397 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 TMEFF2Q9UIK5 374 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP3-206ENST00000452814 TRAV36DV7A0A075B6V5 113 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF503-AS2A6NEH8 195 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 M0R082 166 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CLIC1O00299 241 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 UBDO15205 165 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 IGFBP1P08833 259 aaPredicted RBP13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 NR4A1P22736 598 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 SLC18A1P54219 525 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 DAG1Q14118 895 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 MFSD13AQ14CX5 517 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ADRM1Q16186 407 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 GTDC1Q4AE62 458 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 FAM91A1Q658Y4 838 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF627Q7L945 461 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 MIER2Q8N344 545 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF417Q8TAU3 575 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 ZNF587Q96SQ5 575 aaPredicted RBP13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 NOX3Q9HBY0 568 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
RAB11FIP3-206ENST00000452814 IGKV1D-42A0A075B6H8 117 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 A0A1B0GWA3 101 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 SH3PXD2BA1X283 911 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 C5orf58C9J3I9 102 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 TCF21O43680 179 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 TRAF3IP2O43734 574 aaPredicted RBP13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 ADRA2AP08913 450 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 NUDT7P0C024 238 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 IFNGR1P15260 489 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 PCMT1P22061 227 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 GRPRP30550 384 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 IL2RGP31785 369 aa13.52□□□□□ -0.25
RAB11FIP3-206ENST00000452814 CDH15P55291 814 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms