RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SLC6A20Q9NP91 592 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 B4GALT7Q9UBV7 327 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 STEAP1Q9UHE8 339 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 TRBV11-1A0A0K0K1C0 115 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OR5K4A6NMS3 321 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CALCBP10092 127 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 PKLRP30613 574 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 CCSMST1Q4G0I0 132 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ZNF740Q8NDX6 193 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OR9K2Q8NGE7 335 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OR13C5Q8NGS8 318 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 DTD2Q96FN9 168 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 SFXN2Q96NB2 322 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 RHNO1Q9BSD3 238 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CHST8Q9H2A9 424 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CHRDQ9H2X0 955 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 HHATLQ9HCP6 504 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 H3BNC9 293 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 TO15178 435 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 HOXC11O43248 304 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 KCNK2O95069 426 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OXA1LQ15070 435 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 TMEM64Q6YI46 380 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 GCDHQ92947 438 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 FGGYQ96C11 551 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 RNF170Q96K19 258 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 SLC16A6O15403 523 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PHF1O43189 567 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 GPX5O75715 221 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 UBL3O95164 117 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 HTR1FP30939 366 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PXNP49023 591 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 BAGE2Q86Y30 109 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 KCNRGQ8N5I3 272 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 VN1R3Q9BXE9 311 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 TAF9BQ9HBM6 251 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SIDT1Q9NXL6 827 aaKnown RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 ACAD8Q9UKU7 415 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PPT2Q9UMR5 302 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SLC35A3Q9Y2D2 325 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 HRH3Q9Y5N1 445 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 HMX2A2RU54 273 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 C2orf72A6NCS6 295 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PAPLNO95428 1278 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 GABRA2P47869 451 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 TAS2R46P59540 309 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 ATPAF1Q5TC12 328 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 NXNL2Q5VZ03 156 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 H3F3CQ6NXT2 135 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 TMEM88Q6PEY1 159 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 NANOGP1Q8N7R0 232 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 RARRES3Q9UL19 164 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 ZNF623O75123 536 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SEMA4FO95754 770 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 NANPQ8TBE9 248 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SGK3Q96BR1 496 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 ZNF578Q96N58 590 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 DCLRE1CQ96SD1 692 aaKnown RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 INSM2Q96T92 566 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 CHST11Q9NPF2 352 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 BLVRBP30043 206 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 OR1D4P47884 311 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 KIAA0141Q14154 515 aaPredicted RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 GLYATL3Q5SZD4 288 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 KLHDC9Q8NEP7 349 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 C5P01031 1676 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 DCTN6O00399 190 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 APOA2P02652 100 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 EIF4EP06730 217 aaKnown RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 CNR1P21554 472 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PRLHRP49683 370 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 ISL1P61371 349 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 OTPQ5XKR4 325 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 Q6ZTK2 550 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SYT9Q86SS6 491 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
UBR4-205ENST00000417040 PLPP5Q8NEB5 264 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 DMBX1Q8NFW5 382 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 SEMA4CQ9C0C4 833 aa11.16□□□□□ -0.62
UBR4-205ENST00000417040 AGAP14A8MT82 685 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 CLN5O75503 358 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 ARNTP27540 789 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 IMPA1P29218 277 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 LURAP1Q96LR2 239 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.62
UBR4-205ENST00000417040 LALBAP00709 142 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms