RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TMEM5Q9Y2B1 443 aa17.02■□□□□ 0.32
HOXA9-202ENST00000396345 FREM1Q5H8C1 2179 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 SH3PXD2BA1X283 911 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 EFCAB9A8MZ26 197 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 C11orf98E9PRG8 122 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 BLOC1S5-TXNDC5H3BN57 136 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 TNFRSF11BO00300 401 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 SAGP10523 405 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-202ENST00000396345 EDNRAP25101 427 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 ZP4Q12836 540 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 SP5Q6BEB4 398 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-202ENST00000396345 OR2T5Q6IEZ7 315 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 AAED1Q7RTV5 226 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 PXKQ7Z7A4 578 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 OR4K5Q8NGD3 323 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 OR2T29Q8NH02 315 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 YY1AP1Q9H869 796 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 KRCC1Q9NPI7 259 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-202ENST00000396345 CCM2LQ9NUG4 571 aaPredicted RBP17.01■□□□□ 0.31
HOXA9-202ENST00000396345 ELOVL5Q9NYP7 299 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 NOX1Q9Y5S8 564 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 LYVE1Q9Y5Y7 322 aa17.01■□□□□ 0.31
HOXA9-202ENST00000396345 RNF13O43567 381 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 HLA-DOBP13765 273 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 POU2F1P14859 743 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 CD79BP40259 229 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 GPR4P46093 362 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 HMGA2P52926 109 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 CLDN17P56750 224 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 POU3F1Q03052 451 aaPredicted RBP17■□□□□ 0.31
HOXA9-202ENST00000396345 TMPRSS11FQ6ZWK6 438 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 KIF18BQ86Y91 864 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 FAM46AQ96IP4 442 aaKnown RBP17■□□□□ 0.31
HOXA9-202ENST00000396345 FANCFQ9NPI8 374 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 PRSS50Q9UI38 385 aa17■□□□□ 0.31
HOXA9-202ENST00000396345 TRAF3IP2O43734 574 aaPredicted RBP16.99■□□□□ 0.31
HOXA9-202ENST00000396345 OR10H3O60404 316 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 FKBP6O75344 327 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 SERPINI2O75830 405 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 CST1P01037 141 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 COL8A1P27658 744 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 LIMS1P48059 325 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 SLC9A3P48764 834 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 RPL18Q07020 188 aaKnown RBP16.99■□□□□ 0.31
HOXA9-202ENST00000396345 FAM27E3Q08E93 113 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 CCNIQ14094 377 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 NIPAL3Q6P499 406 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 OAFQ86UD1 273 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 UBE2J2Q8N2K1 259 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 PAPD5Q8NDF8 572 aaKnown RBP16.99■□□□□ 0.31
HOXA9-202ENST00000396345 ANKK1Q8NFD2 765 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 SLCO4A1Q96BD0 722 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 REEP1Q9H902 201 aa16.99■□□□□ 0.31
HOXA9-202ENST00000396345 AKAP8O43823 692 aaKnown RBP16.98■□□□□ 0.31
HOXA9-202ENST00000396345 CNOT4O95628 575 aaKnown RBP16.98■□□□□ 0.31
HOXA9-202ENST00000396345 IGHV3-9P01782 118 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 IFNGR2P38484 337 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 AQP2P41181 271 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 OMPP47874 163 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 PCYT1AP49585 367 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 SELENOPP49908 381 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 LAPTM4AQ15012 233 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 FBXW9Q5XUX1 488 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 MEX3BQ6ZN04 569 aaKnown RBP16.98■□□□□ 0.31
HOXA9-202ENST00000396345 Q6ZT83 130 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 OR4C15Q8NGM1 316 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 MOSPD2Q8NHP6 518 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 RAB3IPQ96QF0 476 aaPredicted RBP16.98■□□□□ 0.31
HOXA9-202ENST00000396345 VNN3Q9NY84 501 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 RCE1Q9Y256 329 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 HIF3AQ9Y2N7 669 aa16.98■□□□□ 0.31
HOXA9-202ENST00000396345 SAMHD1Q9Y3Z3 626 aaKnown RBP16.98■□□□□ 0.31
HOXA9-202ENST00000396345 TRAV27A0A087WT01 109 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 GNGT2O14610 69 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 CDC42EP2O14613 210 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 ADAP00813 363 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 IGFBP2P18065 325 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 PEX19P40855 299 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 SORDQ00796 357 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 PPP1R8Q12972 351 aaKnown RBP16.97■□□□□ 0.31
HOXA9-202ENST00000396345 SNTB1Q13884 538 aaKnown RBP16.97■□□□□ 0.31
HOXA9-202ENST00000396345 ANKDD1AQ495B1 522 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 TSPO2Q5TGU0 170 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 NHLRC1Q6VVB1 395 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 ZER1Q7Z7L7 766 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
HOXA9-202ENST00000396345 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 LINC00471Q8N535 108 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 ACBD4Q8NC06 268 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 OR13C2Q8NGS9 318 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 OR51A7Q8NH64 312 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 TXNDC15Q96J42 360 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 TNFRSF13CQ96RJ3 184 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 SPOCK3Q9BQ16 436 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 ENKD1Q9H0I2 346 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 SLCO5A1Q9H2Y9 848 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 INIPQ9NRY2 104 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 MED29Q9NX70 200 aa16.97■□□□□ 0.31
HOXA9-202ENST00000396345 UPB1Q9UBR1 384 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms