RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 MAGED1Q9Y5V3 778 aaPredicted RBP16.32■□□□□ 0.2
CHTOP-202ENST00000368687 CELSR1Q9NYQ6 3014 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 PLPP3O14495 311 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 ITGA2P17301 1181 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 EDNRAP25101 427 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 CLDN17P56750 224 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 SLC25A3Q00325 362 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 ZP4Q12836 540 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 TRAM2Q15035 370 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 STK11Q15831 433 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 TSPO2Q5TGU0 170 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 HDDC2Q7Z4H3 204 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 TSPYL5Q86VY4 417 aaPredicted RBP16.31■□□□□ 0.2
CHTOP-202ENST00000368687 MUS81Q96NY9 551 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 MUC13Q9H3R2 512 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 OBP2BQ9NPH6 170 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 CD300AQ9UGN4 299 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 A4GNTQ9UNA3 340 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 FAM32AQ9Y421 112 aaKnown RBP16.31■□□□□ 0.2
CHTOP-202ENST00000368687 SNX13Q9Y5W8 968 aa16.31■□□□□ 0.2
CHTOP-202ENST00000368687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 B2RBV5 119 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 MS4A18H0YCH9 400 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 KPNA4O00629 521 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 TRAF3IP2O43734 574 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 RAD51DO75771 328 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ZNF432O94892 652 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 CH25HO95992 272 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ITGA5P08648 1049 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ASAH2BP0C7U1 165 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ADORA3P0DMS8 318 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 UMPSP11172 480 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 NCK1P16333 377 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 CBLP22681 906 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 AHCYP23526 432 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 DNASE1P24855 282 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 SELENOPP49908 381 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 LTBQ06643 244 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 MS4A18Q3C1V0 323 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 KLHL24Q6TFL4 600 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 PAMR1Q6UXH9 720 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 NANOGNBQ7Z5D8 188 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 RNF113BQ8IZP6 322 aaKnown RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 TMEM255BQ8WV15 326 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 LIPHQ8WWY8 451 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 SGTBQ96EQ0 304 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 LRR1Q96L50 414 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ADAD1Q96M93 576 aaKnown RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 NSMCE2Q96MF7 247 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 C1orf21Q9H246 121 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 PLEKHF2Q9H8W4 249 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 B3GAT2Q9NPZ5 323 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 GMPR2Q9P2T1 348 aaKnown RBP16.3■□□□□ 0.2
CHTOP-202ENST00000368687 SEC14L4Q9UDX3 406 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ST6GALNAC2Q9UJ37 374 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 AMDHD2Q9Y303 409 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 ENPP4Q9Y6X5 453 aa16.3■□□□□ 0.2
CHTOP-202ENST00000368687 RPL36A-HNRNPH2H7BZ11 118 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 KLF4O43474 513 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 RAF1P04049 648 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 TCN1P20061 433 aaPredicted RBP16.29■□□□□ 0.2
CHTOP-202ENST00000368687 TSC22D1Q15714 1073 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 GABRA6Q16445 453 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 ANKDD1AQ495B1 522 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 MTX3Q5HYI7 312 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 HMBOX1Q6NT76 420 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 KLHL17Q6TDP4 642 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 C20orf204Q6ZNR8 217 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 C22orf34Q6ZV56 151 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 NKAIN4Q8IVV8 208 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 KDM8Q8N371 416 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 GPR137CQ8N3F9 429 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 RNF148Q8N7C7 305 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 PLPPR2Q96GM1 343 aa16.29■□□□□ 0.2
CHTOP-202ENST00000368687 MEPEQ9NQ76 525 aaPredicted RBP16.29■□□□□ 0.2
CHTOP-202ENST00000368687 STX18Q9P2W9 335 aaKnown RBP16.29■□□□□ 0.2
CHTOP-202ENST00000368687 PRPF19Q9UMS4 504 aaKnown RBP16.29■□□□□ 0.2
CHTOP-202ENST00000368687 ZNF726A6NNF4 738 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 SIAH2O43255 324 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 OR7A10O76100 309 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 WNT11O96014 354 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 HOXB1P14653 301 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-202ENST00000368687 RHCEP18577 417 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 PTNP21246 168 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 UGT2B15P54855 530 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 RRM2BQ7LG56 351 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 TRPM8Q7Z2W7 1104 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 CDK20Q8IZL9 346 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 RBM15BQ8NDT2 890 aaKnown RBP16.28■□□□□ 0.2
CHTOP-202ENST00000368687 ACOT11Q8WXI4 607 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-202ENST00000368687 MCUR1Q96AQ8 359 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 RADILQ96JH8 1075 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 ALKBH3Q96Q83 286 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-202ENST00000368687 OR2M2Q96R28 347 aa16.28■□□□□ 0.2
CHTOP-202ENST00000368687 KRCC1Q9NPI7 259 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-202ENST00000368687 A0A1W2PRQ8 180 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 ARPC2O15144 300 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 RNF13O43567 381 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 ENTPD5O75356 428 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms