RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ST6GALNAC5Q9BVH7 336 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ERVK-6Q9BXR3 956 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TUBB1Q9H4B7 451 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 PDFQ9HBH1 243 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC35D1Q9NTN3 355 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 CTSZQ9UBR2 303 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 DNAJC12Q9UKB3 198 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SPATA2Q9UM82 520 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 FOXJ3Q9UPW0 622 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ICE1Q9Y2F5 2266 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 TEX48A0A1B0GUV7 120 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 EI24O14681 340 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 NOL3O60936 208 aaKnown RBP4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 SMC2O95347 1197 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 SOD1P00441 154 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 HCKP08631 526 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 FCGR3AP08637 254 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CCNB1P14635 433 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 TSPAN8P19075 237 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 PAICSP22234 425 aaKnown RBP4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ERVK11-1P61568 191 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 RHOAP61586 193 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CD300CQ08708 224 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CDC20Q12834 499 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 IHHQ14623 411 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 EXOC3L4Q17RC7 722 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 FAAP20Q6NZ36 180 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 PNCKQ6P2M8 343 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ATRAIDQ6UW56 229 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 P4HA3Q7Z4N8 544 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CENPSQ8N2Z9 138 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR4F17Q8NGA8 305 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR4D9Q8NGE8 314 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 TAF15Q92804 592 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 LHX4Q969G2 390 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ECHDC3Q96DC8 303 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 RAB3CQ96E17 227 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF599Q96NL3 588 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR4F4Q96R69 305 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 C19orf43Q9BQ61 176 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CABLES2Q9BTV7 478 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 FICDQ9BVA6 458 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 DDA1Q9BW61 102 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 LRRC19Q9H756 370 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 JPT2Q9H910 190 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ADGRL4Q9HBW9 690 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC39A1Q9NY26 324 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 GPR83Q9NYM4 423 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 PURGQ9UJV8 347 aaKnown RBP4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 STAP1Q9ULZ2 295 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 TP53TG5Q9Y2B4 290 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 AKAP9Q99996 3911 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 CRYBG3Q68DQ2 2970 aa4.5□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZFHX3Q15911 3703 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 MTORP42345 2549 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 RP1L1Q8IWN7 2480 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 A0A0J9YVX5 310 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 EFCAB7A8K855 629 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 NDC80O14777 642 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 PEX11AO75192 247 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 GNA14O95837 355 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 IGSF6O95976 241 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 SPRP35270 261 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ADRA1AP35348 466 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 SAA4P35542 130 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 GSK3BP49841 420 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 OGDHQ02218 1023 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ELP6Q0PNE2 266 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 KLRB1Q12918 225 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ANKRD55Q3KP44 614 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 WDR59Q6PJI9 974 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ADAMTSL5Q6ZMM2 481 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 HSD11B1LQ7Z5J1 315 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 UMODL1-AS1Q8N2C9 162 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF491Q8N8L2 437 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 TMEM35BQ8NCS4 154 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 GIPC3Q8TF64 312 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 STARD8Q92502 1023 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 NTAN1Q96AB6 310 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 CELF6Q96J87 481 aaKnown RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF641Q96N77 438 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 CATSPER2Q96P56 530 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 RBM24Q9BX46 236 aaKnown RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 SUDS3Q9H7L9 328 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 KAT8Q9H7Z6 458 aaKnown RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ELL3Q9HB65 397 aaPredicted RBP4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 GPATCH2LQ9NWQ4 482 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF446Q9NWS9 450 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 MBD2Q9UBB5 411 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC17A4Q9Y2C5 497 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
RNU4-39P-201ENST00000362455 NPIPA5A0A0B4J1W7 369 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 A0A0J9YWU9 116 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 LRIT2A6NDA9 550 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZSCAN5CA6NGD5 496 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 NPIPA5E9PKD4 350 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 H0YL77 283 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms