RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 SLC36A3Q495N2 470 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 CLEC12AQ5QGZ9 265 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 SMARCD3Q6STE5 483 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 RASSF6Q6ZTQ3 369 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 MCEMP1Q8IX19 187 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 ADPRHL1Q8NDY3 354 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 OR8D4Q8NGM9 314 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 INTS12Q96CB8 462 aaKnown RBP16.65■□□□□ 0.26
TSSC4-201ENST00000333256 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 RASD1Q9Y272 281 aa16.65■□□□□ 0.26
TSSC4-201ENST00000333256 MBD3L4A6NDZ8 208 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 MBD3L3A6NE82 208 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 MBD3L5A6NJ08 208 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 H3BN98 237 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 TSPAN19P0C672 248 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 GLI4P10075 376 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 ALDH3A2P51648 485 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 C1DQ13901 141 aaKnown RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 OGFRL1Q5TC84 451 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 CD300LDQ6UXZ3 194 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 ATCAYQ86WG3 371 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 TUSC5Q8IXB3 177 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 SLC43A2Q8N370 569 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 OR9K2Q8NGE7 335 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 MBD3L2Q8NHZ7 208 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-201ENST00000333256 OXGR1Q96P68 337 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 MED29Q9NX70 200 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 POFUT2Q9Y2G5 429 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 ADAM18Q9Y3Q7 739 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 CDH10Q9Y6N8 788 aa16.64■□□□□ 0.25
TSSC4-201ENST00000333256 A0A1W2PNV4 684 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 NDUFB2O95178 105 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 STSP08842 583 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 HOXD4P09016 255 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-201ENST00000333256 ZNF43P17038 809 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 PER3P56645 1201 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 PRPS1P60891 318 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 COX10Q12887 443 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 FOXF2Q12947 444 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 TOP3AQ13472 1001 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-201ENST00000333256 EEF1A1P5Q5VTE0 462 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 UEVLDQ8IX04 471 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 NAXEQ8NCW5 288 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 TXNDC15Q96J42 360 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
TSSC4-201ENST00000333256 INIPQ9NRY2 104 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 KLHL9Q9P2J3 617 aa16.63■□□□□ 0.25
TSSC4-201ENST00000333256 CCL21O00585 134 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 VAMP5O95183 116 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 RCBTB2O95199 551 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 OSMP13725 252 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 IFNGR1P15260 489 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 EPHA2P29317 976 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 NTF4P34130 210 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 POLR2IP36954 125 aaKnown RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 CTXN1P60606 82 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ERVK-25P63136 954 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 SIRPAP78324 504 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ZP4Q12836 540 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 MELKQ14680 651 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 RNPS1Q15287 305 aaKnown RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 RFX4Q33E94 735 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ZIK1Q3SY52 487 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 PXKQ7Z7A4 578 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 WDFY1Q8IWB7 410 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ZIC4Q8N9L1 334 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 LRRC75AQ8NAA5 344 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 TM9SF2Q99805 663 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 EMC6Q9BV81 110 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 KATNB1Q9BVA0 655 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 TBC1D23Q9NUY8 699 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 IL20Q9NYY1 176 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 USE1Q9NZ43 259 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 MEMO1Q9Y316 297 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 FLVCR1Q9Y5Y0 555 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 E9PLN8 166 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 TRAF3IP2O43734 574 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 PPP1R3DO95685 299 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ANKDD1AQ495B1 522 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 GTF2IRD2BQ6EKJ0 949 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 CREB3L2Q70SY1 520 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 GTF2IRD2Q86UP8 949 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 IQCF1Q8N6M8 205 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 ANKK1Q8NFD2 765 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 VKORC1Q9BQB6 163 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 IFT27Q9BW83 186 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 SF3B5Q9BWJ5 86 aaKnown RBP16.62■□□□□ 0.25
TSSC4-201ENST00000333256 TSSK6Q9BXA6 273 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 RIBC2Q9H4K1 309 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 NOX1Q9Y5S8 564 aa16.62■□□□□ 0.25
TSSC4-201ENST00000333256 IL2RAP01589 272 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 PTDSS1P48651 473 aaKnown RBP16.61■□□□□ 0.25
TSSC4-201ENST00000333256 SLC16A1P53985 500 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 CLDN17P56750 224 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 TAF11Q15544 211 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 ACKR1Q16570 336 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 TMEM236Q5W0B7 351 aa16.61■□□□□ 0.25
TSSC4-201ENST00000333256 NHLRC1Q6VVB1 395 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms