RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NR2F6P10588 404 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OSMP13725 252 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ETFAP13804 333 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 CHI3L1P36222 383 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PJVKQ0ZLH3 352 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 SLC14A1Q13336 389 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 HYAL4Q2M3T9 481 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 EXOSC6Q5RKV6 272 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 HBMQ6B0K9 141 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 SERPINA13PQ6UXR4 307 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF620Q6ZNG0 422 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 GCNT2Q8N0V5 402 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 MMP21Q8N119 569 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 KCNRGQ8N5I3 272 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FAM24BQ8N5W8 94 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FAM98AQ8NCA5 519 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OR51Q1Q8NH59 317 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FIBINQ8TAL6 211 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PAQR8Q8TEZ7 354 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 MRPS31Q92665 395 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 UBE2E3Q969T4 207 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 MOAP1Q96BY2 351 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 S100A13Q99584 98 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 EFCAB11Q9BUY7 163 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 TMED9Q9BVK6 235 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 SF3B5Q9BWJ5 86 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FAIM2Q9BWQ8 316 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 TSSK6Q9BXA6 273 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 POTEKPQ9BYX7 375 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ASB8Q9H765 288 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 IL26Q9NPH9 171 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 TRPC4Q9UBN4 977 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 VPS29Q9UBQ0 182 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FAM96BQ9Y3D0 163 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF587BE7ETH6 402 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 LRRN3E7EW58 273 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 NPC1O15118 1278 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 CDC14BO60729 498 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 IGHA1P01876 353 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OPN1MWP04001 364 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 F13BP05160 661 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OPN1MW2P0DN77 364 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OPN1MW3P0DN78 364 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 CD79AP11912 226 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 GSTM3P21266 225 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 GPR15P49685 360 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 GSK3AP49840 483 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 MECP2P51608 486 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PITPNAQ00169 270 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 RAB40BQ12829 278 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 MEF2DQ14814 521 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF546Q86UE3 836 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 GTPBP8Q8N3Z3 284 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PNLDC1Q8NA58 520 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 OR8J1Q8NGP2 316 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 NUBPLQ8TB37 319 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ING5Q8WYH8 240 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 EXTL1Q92935 676 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 SLC6A18Q96N87 628 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 LMF1Q96S06 567 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 UTP23Q9BRU9 249 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF2Q9BSG1 426 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 LRRN3Q9H3W5 708 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PELI2Q9HAT8 420 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 TPT1P8Q9HAU6 139 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 KRCC1Q9NPI7 259 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 INPP5EQ9NRR6 644 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 PRODH2Q9UF12 536 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 EXOSC1Q9Y3B2 195 aaKnown RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 FBXO7Q9Y3I1 522 aa6.11□□□□□ -1.43
ZNF540-201ENST00000316433 ZFP37Q9Y6Q3 630 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-201ENST00000316433 COL4A3Q01955 1670 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 SLC5A10A0PJK1 596 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 UBE2QL1A1L167 161 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 J3QRE1 110 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 J3QW42 95 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TLR4O00206 839 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 GABRPO00591 440 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CTDSPLO15194 276 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TGOLN2O43493 480 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 HYAL3O43820 417 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TLR5O60602 858 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TSPAN3O60637 253 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 UBL3O95164 117 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TXNDC12O95881 172 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 FABP4P15090 132 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 AGTR1P30556 359 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CEACAM8P31997 349 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 TSFMP43897 325 aaKnown RBP6.1□□□□□ -1.43
ZNF540-201ENST00000316433 OR3A1P47881 315 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 MTNR1BP49286 362 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 CRISP1P54107 249 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 NRG3P56975 720 aa6.1□□□□□ -1.43
ZNF540-201ENST00000316433 WDR5P61964 334 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms