RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 Q5BKY6 102 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SLITRK4Q8IW52 837 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 C9orf40Q8IXQ3 194 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 LGALS14Q8TCE9 139 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 CACNG2Q9Y698 323 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 CACNA1CQ13936 2221 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 IGKV3D-11A0A0A0MRZ8 115 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 A0A1B0GTH9 108 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 FRG2CA6NGY1 282 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 IL12BP29460 328 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 BTCP35070 178 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 NTRK2Q16620 822 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 OGFOD3Q6PK18 319 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 NANOGNBQ7Z5D8 188 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 RGP1Q92546 391 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 RNF166Q96A37 237 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 ADAD1Q96M93 576 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 TSPAN32Q96QS1 320 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 GFI1Q99684 422 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SYNDIG1Q9H7V2 258 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 TEKT2Q9UIF3 430 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 PCNX3Q9H6A9 2034 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 CFAP54Q96N23 3096 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 IGHV1OR21-1A0A087WYE8 117 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 FAM172BPA6NC97 362 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 C11orf98E9PRG8 122 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 YES1P07947 543 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 EVI2BP34910 448 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 CLDN12P56749 244 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 PLA1AQ53H76 456 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 MESTQ5EB52 335 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 BCL2L15Q5TBC7 163 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 ASCC1Q8N9N2 400 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 FOXN4Q96NZ1 517 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 ING1Q9UK53 422 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 MMACHCQ9Y4U1 282 aa16.68■□□□□ 0.26
SHKBP1-201ENST00000291842 GATBO75879 557 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 PIAS2O75928 621 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 UQCRC1P31930 480 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ISXQ2M1V0 245 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 CCDC58Q4VC31 144 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 OR6V1Q8N148 313 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 GCDHQ92947 438 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 CREB3L1Q96BA8 519 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 EXOSC3Q9NQT5 275 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 MKL2Q9ULH7 1088 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 RRAS2P62070 204 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 SMAD4Q13485 552 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 IL10RAQ13651 578 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 EFR3AQ14156 821 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 EBPQ15125 230 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ODF4Q2M2E3 257 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF684Q5T5D7 378 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 HLA-DQA1Q5Y7H0 255 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 EXD3Q8N9H8 876 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 YIPF5Q969M3 257 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC25A36Q96CQ1 311 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 OR1F2PQ96R84 312 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 DPYSL5Q9BPU6 564 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 SYT4Q9H2B2 425 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 WDR76Q9H967 626 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF304Q9HCX3 659 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 NUDT15Q9NV35 164 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ANKRD10Q9NXR5 420 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ABRACLQ9P1F3 81 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF281Q9Y2X9 895 aa16.67■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF879B4DU55 563 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 NDUFB5O43674 189 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 PLGP00747 810 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 HIST1H2ABP04908 130 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 BCKDHBP21953 392 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 FBLP22087 321 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 CSF2RBP32927 897 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SOX2P48431 317 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 ELAVL1Q15717 326 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 UNQ9370/PRO34162Q6UXP9 181 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 HIST3H2AQ7L7L0 130 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC16A9Q7RTY1 509 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 OVCH1Q7RTY7 1134 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SIAH3Q8IW03 269 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SERPINA12Q8IW75 414 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 TOMM5Q8N4H5 51 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 HIST1H2ACQ93077 130 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 ZCCHC4Q9H5U6 513 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 MRM2Q9UI43 246 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 A0A0A6YYJ9 748 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 ARHGEF9O43307 516 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SCO2O43819 266 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 CXCR1P25024 350 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 PLCXD2Q0VAA5 305 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 BIKQ13323 160 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 ARHGAP40Q5TG30 622 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 STPG1Q5TH74 334 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 LIPNQ5VXI9 398 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 PRR23CQ6ZRP0 262 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 LANCL3Q6ZV70 420 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC35F3Q8IY50 421 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
SHKBP1-201ENST00000291842 LIPHQ8WWY8 451 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms