RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ALOX12BO75342 701 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 BMP1P13497 986 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 GDF1P27539 372 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 UBE2NP61088 152 aaKnown RBP15.4■□□□□ 0.06
PHRF1-201ENST00000264555 LYPD4Q6UWN0 246 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 VASH1Q7L8A9 365 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-201ENST00000264555 GRINAQ7Z429 371 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 ETFBKMTQ8IXQ9 262 aa15.4■□□□□ 0.06
PHRF1-201ENST00000264555 MEIS3P1A6NDR6 274 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SERPINA5P05154 406 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SMAD4Q13485 552 aaKnown RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 C1orf140Q5VVS0 124 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 APOOLQ6UXV4 268 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SYT3Q9BQG1 590 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 NRSN2Q9GZP1 204 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 MCTS1Q9ULC4 181 aaKnown RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 LOC102725191A0A1B0GVB3 256 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 A6NCN8 305 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 WISP3O95389 354 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PAPLNO95428 1278 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PPICP45877 212 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 C21orf58P58505 322 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 HYAL1Q12794 435 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 TCTN1Q2MV58 587 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 ULBP2Q9BZM5 246 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SLC38A1Q9H2H9 487 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PIGBOS1A0A0B4J2F0 54 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PPM1DO15297 605 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SLC35A1P78382 337 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 FAM53BQ14153 422 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 NIPAL3Q6P499 406 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PAQR6Q6TCH4 344 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 C3P1Q6ZMU1 363 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 ZNF547Q8IVP9 402 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 APMAPQ9HDC9 416 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 FAM86C1Q9NVL1 165 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 CAMK2AQ9UQM7 478 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 RGPD4Q7Z3J3 1758 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PTGS2P35354 604 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 KCNAB1Q14722 419 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SOWAHCQ53LP3 525 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 C8orf82Q6P1X6 216 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SPTY2D1-AS1A0A0U1RR47 76 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SELENOFO60613 162 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 WDPCPO95876 746 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PDZD9Q8IXQ8 264 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 ELMOD3Q96FG2 381 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 C11orf54Q9H0W9 315 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-201ENST00000264555 GAREM1Q9H706 876 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 OR2S2Q9NQN1 319 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 PLEKHJ1Q9NW61 149 aa15.39■□□□□ 0.05
PHRF1-201ENST00000264555 SLC2A10O95528 541 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 EIF1P41567 113 aaKnown RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 SSR4P51571 173 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 CLDN12P56749 244 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 SMAD2Q15796 467 aaKnown RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 DCAF12Q5T6F0 453 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 OR1J4Q8NGS1 313 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 COX14Q96I36 57 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 PLA2G2FQ9BZM2 168 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 OSGIN1Q9UJX0 560 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 FUCA1P04066 466 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 MSX1P28360 303 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 GDNFP39905 211 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 MVB12AQ96EY5 273 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 POMT2Q9UKY4 750 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 SURF4O15260 269 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 P2RX1P51575 399 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 DLX5P56178 289 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 CNN3Q15417 329 aaKnown RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 PM20D2Q8IYS1 436 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 TMEM99Q8N816 258 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 OPALINQ96PE5 141 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 CSF3RQ99062 836 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 ELF4Q99607 663 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 VSX1Q9NZR4 365 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 NUP50Q9UKX7 468 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 MEN1O00255 615 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 ARPC5O15511 151 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 CHRNB1P11230 501 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 SNU13P55769 128 aaKnown RBP15.38■□□□□ 0.05
PHRF1-201ENST00000264555 CXADRP78310 365 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 BTG2P78543 158 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 MEP1BQ16820 701 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 FCRL6Q6DN72 434 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 ETV7Q9Y603 341 aa15.38■□□□□ 0.05
PHRF1-201ENST00000264555 SRMP19623 302 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 SLC26A5P58743 744 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 PCBD1P61457 104 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 PRAMEF20Q5VT98 475 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 CLEC1AQ8NC01 280 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 C16orf52Q8NHV5 167 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 OXA1LQ15070 435 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 NKAIN1Q4KMZ8 207 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 CFAP77Q6ZQR2 320 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 LINC01555Q8NAE3 123 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 RCBTB1Q8NDN9 531 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 ST6GALNAC5Q9BVH7 336 aa15.37■□□□□ 0.05
PHRF1-201ENST00000264555 PARPBPQ9NWS1 579 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms