RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 IL18Q14116 193 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 TAB1Q15750 504 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 MESTQ5EB52 335 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 PHF19Q5T6S3 580 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 NR2C2APQ86WQ0 139 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 IFI44Q8TCB0 444 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 HPS1Q92902 700 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 TTYH2Q9BSA4 534 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 ACOXLQ9NUZ1 547 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 PCNX3Q9H6A9 2034 aa11.73□□□□□ -0.53
SPTLC1-201ENST00000262554 TRAV1-2A0A0B4J238 106 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TRBV11-1A0A0K0K1C0 115 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TMEM72A0PK05 275 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 VSTM2BA6NLU5 285 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ARL6IP5O75915 188 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 DAB2P98082 770 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ZXDAP98168 799 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 COL28A1Q2UY09 1125 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 FAM69AQ5T7M9 428 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C1QL3Q5VWW1 255 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ZNF385CQ66K41 422 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SFXN4Q6P4A7 337 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 LYPD4Q6UWN0 246 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C5orf46Q6UWT4 87 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ZNF511Q8NB15 262 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 THAP3Q8WTV1 239 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TMEM234Q8WY98 164 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TXNDC15Q96J42 360 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC22A4Q9H015 551 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 PPP1R3EQ9H7J1 279 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SRA1Q9HD15 236 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ASCC3Q8N3C0 2202 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 XKRYO14609 159 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SEC14L5O43304 696 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SSX4O60224 188 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 GPRIN2O60269 458 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 GATBO75879 557 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TACSTD2P09758 323 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC2A2P11168 524 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 RAB3BP20337 219 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 APEX1P27695 318 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 GRPRP30550 384 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 FBXW4P57775 412 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 CD300CQ08708 224 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C17orf67Q0P5P2 114 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 MADCAM1Q13477 382 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 RIN1Q13671 783 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SGCBQ16585 318 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C1orf140Q5VVS0 124 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC6A19Q695T7 634 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 FAM220AQ7Z4H9 259 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 BPHLQ86WA6 291 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ADGRG3Q86Y34 549 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 Q8N402 240 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 OR5L2Q8NGL0 311 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 OR13C5Q8NGS8 318 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 STK35Q8TDR2 534 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 GFM1Q96RP9 751 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 CRB3Q9BUF7 120 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 PTDSS2Q9BVG9 487 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 INIPQ9NRY2 104 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 MALT1Q9UDY8 824 aa11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 C19orf25Q9UFG5 118 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-201ENST00000262554 ANKUB1A6NFN9 424 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 H7C1C5 153 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 ARHGEF9O43307 516 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 NPIPB7O75200 414 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 TRIM3O75382 744 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 OR6A2O95222 327 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 AHSA1O95433 338 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 NAGAP17050 411 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 PRKCAP17252 672 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 ELK1P19419 428 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 TALDO1P37837 337 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 PSMB10P40306 273 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 RFX2P48378 723 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 OR10A3P58181 314 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 LCN6P62502 163 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 TRIQKQ629K1 86 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 SPATC1Q76KD6 591 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 LRRC28Q86X40 367 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.53
SPTLC1-201ENST00000262554 CELF2-AS1Q8N7Q2 184 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms