RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PRRC1Q96M27 445 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 ALKBH3Q96Q83 286 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 FKRPQ9H9S5 495 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 UBTD1Q9HAC8 227 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 NGBQ9NPG2 151 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 RHCGQ9UBD6 479 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 RCE1Q9Y256 329 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 MYO9AB2RTY4 2548 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 CSMD2Q7Z408 3487 aa15.79■□□□□ 0.12
SNRPA1-201ENST00000254193 AKAP6Q13023 2319 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 ENO4A6NNW6 628 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 ZNF587BE7ETH6 402 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 C11orf98E9PRG8 122 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 J3KTA2 159 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 SLC43A1O75387 559 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 ADORA3P0DMS8 318 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 THRBP10828 461 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 DNASE1P24855 282 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 MSX2P35548 267 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 RBM34P42696 430 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 KEAP1Q14145 624 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 OR7E24Q6IFN5 339 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 NHLRC1Q6VVB1 395 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 ZNF704Q6ZNC4 412 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 SLC46A3Q7Z3Q1 461 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 DEFB107AQ8IZN7 70 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 TMEM239Q8WW34 195 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 NINJ1Q92982 152 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 OR2M2Q96R28 347 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 EMC6Q9BV81 110 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 NANSQ9NR45 359 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 MED29Q9NX70 200 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 NPAP1Q9NZP6 1156 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 EDARQ9UNE0 448 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 NOX1Q9Y5S8 564 aa15.78■□□□□ 0.12
SNRPA1-201ENST00000254193 FREM1Q5H8C1 2179 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 DPRXA6NFQ7 191 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 OR6C65A6NJZ3 312 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 FFAR1O14842 300 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 GMNNO75496 209 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 OR6A2O95222 327 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ATE1O95260 518 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 MT-ND1P03886 318 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 RAF1P04049 648 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ASAH2BP0C7U1 165 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 UMPSP11172 480 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 HSD17B1P14061 328 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ART1P52961 327 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 LSM11P83369 360 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 TGFBR3Q03167 851 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ST3GAL3Q11203 375 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 SAMD4BQ5PRF9 694 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 NCMAPQ5T1S8 102 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 CARD17Q5XLA6 110 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 C16orf89Q6UX73 402 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ABHD12BQ7Z5M8 362 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 PXKQ7Z7A4 578 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 WDFY1Q8IWB7 410 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 TMEM123Q8N131 208 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 WDR31Q8NA23 367 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 SGTBQ96EQ0 304 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 NSL1Q96IY1 281 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 HS6ST2Q96MM7 605 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 TMEM204Q9BSN7 226 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 LINC00470Q9BZP3 86 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ESRP2Q9H6T0 727 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 C20orf141Q9NUB4 165 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 TAS2R5Q9NYW4 299 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 CD300AQ9UGN4 299 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 ZNF229Q9UJW7 825 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 RPS6KA6Q9UK32 745 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 SLC25A15Q9Y619 301 aa15.77■□□□□ 0.12
SNRPA1-201ENST00000254193 B2RBV5 119 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 CLOCKO15516 846 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 PIP5K1CO60331 668 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 HIST1H2ABP04908 130 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 FUT1P19526 365 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 IFNA8P32881 189 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 ZNF83P51522 516 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 MNAT1P51948 309 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 ROR2Q01974 943 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 BSPH1Q075Z2 132 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 TESK1Q15569 626 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 ACKR1Q16570 336 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 HIKESHIQ53FT3 197 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 HIST3H2AQ7L7L0 130 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 TSEN54Q7Z6J9 526 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 GPR137CQ8N3F9 429 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 FAM86B1Q8N7N1 296 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 C1orf162Q8NEQ5 155 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 HIST1H2ACQ93077 130 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 FNDC11Q9BVV2 318 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 C1QTNF6Q9BXI9 259 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 SLC17A5Q9NRA2 495 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 MAN2C1Q9NTJ4 1040 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 DCAF13Q9NV06 445 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 NDE1Q9NXR1 346 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 MED31Q9Y3C7 131 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 RNF115Q9Y4L5 304 aa15.76■□□□□ 0.11
SNRPA1-201ENST00000254193 SLC35F4A4IF30 521 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms