RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ADORA3P0DMS8 318 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 ZNF26P17031 533 aaPredicted RBP12.54□□□□□ -0.4
VPS25-201ENST00000253794 OPRM1P35372 400 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 FXYD6P3P58550 94 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 RPL18Q07020 188 aaKnown RBP12.54□□□□□ -0.4
VPS25-201ENST00000253794 FOXF2Q12947 444 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 ZNF620Q6ZNG0 422 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 RASSF6Q6ZTQ3 369 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 CREB3L2Q70SY1 520 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 TUSC5Q8IXB3 177 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 LRRC75AQ8NAA5 344 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 OR13C2Q8NGS9 318 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 ASB5Q8WWX0 329 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
VPS25-201ENST00000253794 TNFRSF13CQ96RJ3 184 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 FEVQ99581 238 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 DCLRE1BQ9H816 532 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 MCCC2Q9HCC0 563 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
VPS25-201ENST00000253794 RNF6Q9Y252 685 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
VPS25-201ENST00000253794 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 DOPEY1Q5JWR5 2465 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 TRAV27A0A087WT01 109 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 OR6A2O95222 327 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
VPS25-201ENST00000253794 CGAP01215 116 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 CD8BP10966 210 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 ZNF43P17038 809 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 AQP2P41181 271 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 SMSP52788 366 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 PER3P56645 1201 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 TAF11Q15544 211 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 ALG10Q5BKT4 473 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 TMEM201Q5SNT2 666 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 RPL13AP3Q6NVV1 102 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 SMARCD3Q6STE5 483 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 NCCRP1Q6ZVX7 275 aaPredicted RBP12.53□□□□□ -0.4
VPS25-201ENST00000253794 GALNT5Q7Z7M9 940 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
VPS25-201ENST00000253794 HS3ST5Q8IZT8 346 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 PARP8Q8N3A8 854 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 MOSPD2Q8NHP6 518 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 STARD4Q96DR4 205 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 PIGMQ9H3S5 423 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 JKAMPQ9P055 326 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 STX18Q9P2W9 335 aaKnown RBP12.53□□□□□ -0.4
VPS25-201ENST00000253794 OAZ3Q9UMX2 235 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 CDH10Q9Y6N8 788 aa12.53□□□□□ -0.4
VPS25-201ENST00000253794 RNF13O43567 381 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 MGRN1O60291 552 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 ZNF432O94892 652 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 NDUFB2O95178 105 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 TP53P04637 393 aaPredicted RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 HLA-DOBP13765 273 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 ANPEPP15144 967 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 ZNF23P17027 643 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 CHRNB4P30926 498 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 NTF4P34130 210 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 PCYT1AP49585 367 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 PPP2R2BQ00005 443 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 POU3F1Q03052 451 aaPredicted RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 RIPK1Q13546 671 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 RCN1Q15293 331 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 RFX4Q33E94 735 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 KDM4DQ6B0I6 523 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 GPAT4Q86UL3 456 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 UEVLDQ8IX04 471 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 KDM8Q8N371 416 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 OR51A7Q8NH64 312 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 ZNF385AQ96PM9 386 aaKnown RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 NIPSNAP1Q9BPW8 284 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 NDEL1Q9GZM8 345 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 SEMA6AQ9H2E6 1030 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 OR52D1Q9H346 318 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 PARPBPQ9NWS1 579 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 USE1Q9NZ43 259 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 REV1Q9UBZ9 1251 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 CLEC4AQ9UMR7 237 aa12.52□□□□□ -0.41
VPS25-201ENST00000253794 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
VPS25-201ENST00000253794 OR6C65A6NJZ3 312 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 CENPBD1B2RD01 187 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 DVL2O14641 736 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 MSTNO14793 375 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 CNOT4O95628 575 aaKnown RBP12.51□□□□□ -0.41
VPS25-201ENST00000253794 TXNDC12O95881 172 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 CD14P08571 375 aa12.51□□□□□ -0.41
VPS25-201ENST00000253794 PRKACGP22612 351 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms