RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SCG5P05408 212 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF17P17021 662 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 SDHAP31040 664 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 PTGDSP41222 190 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 ZP4Q12836 540 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 MLLT11Q13015 90 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 AIMP2Q13155 320 aaKnown RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 GGTLC2Q14390 218 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 SPHARQ15513 63 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 PLPPR5Q32ZL2 321 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 ALG10Q5BKT4 473 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 C1orf140Q5VVS0 124 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 GPR107Q5VW38 600 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 C3orf33Q6P1S2 294 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 THSD4Q6ZMP0 1018 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 HDDC2Q7Z4H3 204 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 ADGRG3Q86Y34 549 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 PLCZ1Q86YW0 608 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 CPOQ8IVL8 374 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 NANOGP1Q8N7R0 232 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 OR5J2Q8NH18 312 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 THAP3Q8WTV1 239 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 SGCDQ92629 289 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 C12orf43Q96C57 262 aaKnown RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 RNFT2Q96EX2 444 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 MNTQ99583 582 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 COQ7Q99807 217 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 FUNDC2Q9BWH2 189 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 RTN4RQ9BZR6 473 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 AMBNQ9NP70 447 aa11.92□□□□□ -0.5
SLIRP-201ENST00000238688 HINT3Q9NQE9 182 aaKnown RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
SLIRP-201ENST00000238688 A6NL46 340 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 SNPHO15079 494 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF354AO60765 605 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 UQCRFS1P47985 274 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 RNF144AP50876 292 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 RRADP55042 308 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 WNT4P56705 351 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 SOX8P57073 446 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TUBA1BP68363 451 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 HSF2Q03933 536 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 SELENBP1Q13228 472 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ITGADQ13349 1161 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 GPR50Q13585 617 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 DCAF10Q5QP82 559 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TMPRSS11AQ6ZMR5 421 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TUBA1AQ71U36 451 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ACBD7Q8N6N7 88 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 C10orf53Q8N6V4 93 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 LRRC75AQ8NAA5 344 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 OR2M3Q8NG83 312 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 OR4K17Q8NGC6 315 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 OR52I1Q8NGK6 324 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 C1GALT1C1Q96EU7 318 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ERMAPQ96PL5 475 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 MGLLQ99685 303 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 MESP1Q9BRJ9 268 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TAPBPLQ9BX59 468 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF552Q9H707 407 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 TNFRSF10DQ9UBN6 386 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 AASSQ9UDR5 926 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 B3GALT5Q9Y2C3 310 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 LSM2Q9Y333 95 aaKnown RBP11.91□□□□□ -0.5
SLIRP-201ENST00000238688 HDGFL3Q9Y3E1 203 aa11.91□□□□□ -0.5
SLIRP-201ENST00000238688 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 LINC01387J3KSC0 135 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 M0R129 80 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 CCRL2O00421 344 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 DNPH1O43598 174 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 PPP1R3DO95685 299 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 CD53P19397 219 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 GALP22466 123 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 SLC2A5P22732 501 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 GTF2E2P29084 291 aaKnown RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 MAP2K4P45985 399 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 DSCR4P56555 118 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 TAS2R43P59537 309 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 PIGFQ07326 219 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF239Q16600 458 aaKnown RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 ZNF362Q5T0B9 420 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 FAM122BQ7Z309 247 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 GTPBP8Q8N3Z3 284 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 OR5M3Q8NGP4 307 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 TAAR8Q969N4 342 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-201ENST00000238688 RHNO1Q9BSD3 238 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 PTDSS2Q9BVG9 487 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 NMNAT2Q9BZQ4 307 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 YIPF3Q9GZM5 350 aa11.9□□□□□ -0.5
SLIRP-201ENST00000238688 CDCP1Q9H5V8 836 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms