RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 KLHL36Q8N4N3 616 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 JSRP1Q96MG2 331 aaPredicted RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 ADGRL4Q9HBW9 690 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 STMN3Q9NZ72 180 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ABI3Q9P2A4 366 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 C12orf71A8MTZ7 269 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 AIREO43918 545 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 EFNA2O43921 213 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 CBR3O75828 277 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 LIPCP11150 499 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 SPI1P17947 270 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 IL11P20809 199 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ITGA3P26006 1051 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 DPP4P27487 766 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 CDKN2AP42771 156 aaKnown RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 SLC25A1P53007 311 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 SRSF6Q13247 344 aaKnown RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 GGTLC2Q14390 218 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 SPCS2Q15005 226 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 PON3Q15166 354 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 MESTQ5EB52 335 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ATP1A1-AS1Q5TC04 95 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 OR2G6Q5TZ20 316 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ABHD17BQ5VST6 288 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 C19orf48Q6RUI8 117 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 GTPBP8Q8N3Z3 284 aaPredicted RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 POMGNT2Q8NAT1 580 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 CLEC1AQ8NC01 280 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 OR52N1Q8NH53 320 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ZPLD1Q8TCW7 415 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 GNRHR2Q96P88 292 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ZNF649Q9BS31 505 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ISYNA1Q9NPH2 558 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ASB6Q9NWX5 421 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ALKBH4Q9NXW9 302 aa16.35■□□□□ 0.21
VIM-201ENST00000224237 ZNF346Q9UL40 294 aaKnown RBP16.35■□□□□ 0.21
VIM-201ENST00000224237 LIPT2A6NK58 231 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 G3V3Y1 287 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 FZD7O75084 574 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 TRIM3O75382 744 aaPredicted RBP16.34■□□□□ 0.21
VIM-201ENST00000224237 IGHMP01871 453 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 IMPDH2P12268 514 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 TCEA1P23193 301 aaKnown RBP16.34■□□□□ 0.21
VIM-201ENST00000224237 GADD45AP24522 165 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 CASRP41180 1078 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
VIM-201ENST00000224237 ACTC1P68032 377 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 ACTA1P68133 377 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 OC90Q02509 493 aaPredicted RBP16.34■□□□□ 0.21
VIM-201ENST00000224237 PUDPQ08623 228 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 DBPQ10586 325 aaPredicted RBP16.34■□□□□ 0.21
VIM-201ENST00000224237 VASH2Q86V25 355 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 ZNF248Q8NDW4 579 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 NXPE2Q96DL1 559 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 DKKL1Q9UK85 242 aa16.34■□□□□ 0.21
VIM-201ENST00000224237 BCL10O95999 233 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 MRPL3P09001 348 aaKnown RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 ZNF182P17025 639 aaPredicted RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 VBP1P61758 197 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 LSM3P62310 102 aaKnown RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 ZP4Q12836 540 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 MYBPHQ13203 477 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 DCTN2Q13561 401 aaKnown RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 SSX1Q16384 188 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 H1FNTQ75WM6 255 aaPredicted RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 ADCK1Q86TW2 530 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 ATCAYQ86WG3 371 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 GHDCQ8N2G8 530 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 ARIH2OSQ8N7S6 290 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 ZNF485Q8NCK3 441 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 OR10H4Q8NGA5 316 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 OR5M1Q8NGP8 315 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 GATAD2BQ8WXI9 593 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 SMPDL3BQ92485 455 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 RPL3LQ92901 407 aaKnown RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 ARHGAP9Q9BRR9 750 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 RPRD1BQ9NQG5 326 aaKnown RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 CAB39Q9Y376 341 aaPredicted RBP16.33■□□□□ 0.21
VIM-201ENST00000224237 PCDHGB7Q9Y5F8 929 aa16.33■□□□□ 0.21
VIM-201ENST00000224237 XKRYO14609 159 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 SLC30A4O14863 429 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 PLGP00747 810 aaPredicted RBP16.33■□□□□ 0.2
VIM-201ENST00000224237 RENP00797 406 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 ZNF17P17021 662 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 DNASE1L1P49184 302 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 DIO1P49895 249 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 RPL27P61353 136 aaKnown RBP16.33■□□□□ 0.2
VIM-201ENST00000224237 NCS1P62166 190 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 TLE3Q04726 772 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 ACKR1Q16570 336 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 TMPRSS11AQ6ZMR5 421 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 ZNF227Q86WZ6 799 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 TMEM99Q8N816 258 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 ZMYND19Q96E35 227 aaPredicted RBP16.33■□□□□ 0.2
VIM-201ENST00000224237 SNX18Q96RF0 628 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 CNN2Q99439 309 aaKnown RBP16.33■□□□□ 0.2
VIM-201ENST00000224237 ALG8Q9BVK2 526 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 TMEM185BQ9H7F4 350 aa16.33■□□□□ 0.2
VIM-201ENST00000224237 CHST11Q9NPF2 352 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms