RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 CgaP01216 120 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cav3P51637 151 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Atp5j2P56135 88 aaKnown RBP14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Il12rb2P97378 874 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prtn3Q61096 254 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Clec7aQ6QLQ4 244 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vangl1Q80Z96 526 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lpar4Q8BLG2 370 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 B4gat1Q8BWP8 415 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Itfg2Q91WI7 443 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rtl8cQ9D6I0 112 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Elovl4Q9EQC4 312 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 NmuQ9QXK8 174 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 RlimQ9WTV7 600 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sbf2E9PXF8 1872 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr420E9Q4G0 321 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Pmm1O35621 262 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc35g3Q5F297 340 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Clns1aQ61189 236 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 DmknQ6P253 517 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Pqlc3Q8C6U2 202 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr881Q8VF63 314 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr514Q8VFZ6 310 aa14.45□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm8888J3QPX5 126 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 NelfeP19426 375 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Kcne1P23299 129 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ugt8Q64676 541 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lcn10Q810Z1 182 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mfsd11Q8BJ51 449 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cd209dQ91ZW8 237 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 EsamQ925F2 394 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ccdc54Q9DAL3 329 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r53Q9EP93 310 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Alx3O70137 343 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmprss11bQ14C59 416 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmeff1Q6PFE7 372 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 2610318N02RikQ80VT5 305 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Poldip3Q8BG81 420 aaKnown RBP14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 P2ry10bQ8BY68 352 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfpm2Q8CCH7 1151 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sgk3Q9ERE3 496 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fbxo8Q9QZN3 319 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr1555-ps1A0A140LHT7 321 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmsb15aA2AEH9 79 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr376E9Q4M1 320 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prps1l3G3UXL2 318 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Bcl2l11O54918 196 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 H2-K1P01901 369 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Clk1P22518 483 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Clec3bP43025 202 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zic1P46684 447 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Arf1P84078 181 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mef2aQ60929 498 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc35a1Q61420 336 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 ShbQ6PD21 503 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fbxo22Q78JE5 402 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r229Q8R2A9 306 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Foxe1Q8R2I0 371 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr166Q8VGX2 312 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Obp1aQ9D3H2 163 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prps1Q9D7G0 318 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tox2A2A472 547 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 4930402F06RikA2AUQ8 332 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 CryabP23927 175 aaKnown RBP14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rad52P43352 420 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rras2P62071 204 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 NfkbidQ2TB02 327 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm10696Q3UTC4 357 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hspb6Q5EBG6 162 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Wdr92Q8BGF3 357 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gpat4Q8K2C8 456 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Galnt11Q921L8 608 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mrps14Q9CR88 128 aa14.44□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr1338A2ACY7 313 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfp352A2AML7 551 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zbtb34A2ATY4 518 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nr1h5E9Q5A6 505 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fam122bQ6NZE7 255 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 PxnQ8VI36 591 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zdhhc4Q9D6H5 343 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slamf9Q9D780 285 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Skint2A7XUX6 400 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Skint8A7XV07 398 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm45692D3Z0A0 150 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Wnt3P17553 355 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fmo1P50285 532 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nrg2P56974 756 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Nrsn2Q5HZK2 202 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 TefmQ5SSK3 364 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sox11Q7M6Y2 395 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Arhgef4Q7TNR9 484 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zar1Q80SU3 361 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 CslQ80X68 466 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Adam30Q811Q3 732 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lin28aQ8K3Y3 209 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr836Q8VFJ3 317 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr668Q8VGW3 318 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gdpd1Q9CRY7 314 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc6a19Q9D687 634 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Pebp4Q9D9G2 242 aa14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 96.3 ms