RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 P2RY8Q86VZ1 359 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 RBM45Q8IUH3 476 aaKnown RBP11.8□□□□□ -0.52
CTSA-213ENST00000606782 LSMEM1Q8N8F7 131 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 OR6T1Q8NGN1 323 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 TMEM171Q8WVE6 324 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 PROX1Q92786 737 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 POP5Q969H6 163 aaKnown RBP11.8□□□□□ -0.52
CTSA-213ENST00000606782 PYURFQ96I23 114 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 ZNF300Q96RE9 604 aaPredicted RBP11.8□□□□□ -0.52
CTSA-213ENST00000606782 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 POTEKPQ9BYX7 375 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 CTPS2Q9NRF8 586 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 SLC13A4Q9UKG4 626 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
CTSA-213ENST00000606782 TRAPPC4Q9Y296 219 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 SH3GLB1Q9Y371 365 aa11.8□□□□□ -0.52
CTSA-213ENST00000606782 SPIN1Q9Y657 262 aaPredicted RBP11.8□□□□□ -0.52
CTSA-213ENST00000606782 ZNF716A6NP11 495 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 OVOL3O00110 214 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 FRS3O43559 492 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 FMO6PO60774 539 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 ZNF682O95780 498 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 HEXAP06865 529 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 ATP6V1B2P21281 511 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 EDNRAP25101 427 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 SLC1A3P43003 542 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 IDH2P48735 452 aaKnown RBP11.79□□□□□ -0.52
CTSA-213ENST00000606782 H3F3AP84243 136 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 HOXC5Q00444 222 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 TSC22D1Q15714 1073 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 NPTX1Q15818 432 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 CLEC9AQ6UXN8 241 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 CYP2R1Q6VVX0 501 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 BHLHA15Q7RTS1 189 aaPredicted RBP11.79□□□□□ -0.52
CTSA-213ENST00000606782 CARM1Q86X55 608 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 CIARTQ8N365 385 aaPredicted RBP11.79□□□□□ -0.52
CTSA-213ENST00000606782 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTSA-213ENST00000606782 CCDC124Q96CT7 223 aaKnown RBP11.79□□□□□ -0.52
CTSA-213ENST00000606782 PERPQ96FX8 193 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 TPD52L3Q96J77 140 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 ARL5BQ96KC2 179 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 Q96MF0 132 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 TRIM2Q9C040 744 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 CXorf56Q9H5V9 222 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 ESRP2Q9H6T0 727 aaKnown RBP11.79□□□□□ -0.52
CTSA-213ENST00000606782 EMC3Q9P0I2 261 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 SLC9A8Q9Y2E8 581 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 RNF115Q9Y4L5 304 aa11.79□□□□□ -0.52
CTSA-213ENST00000606782 AQP12BA6NM10 295 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 H7C1Q1 480 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 M0R3H8 397 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 GPR171O14626 319 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 ZNF208O43345 1280 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 SEMG1P04279 462 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 CD3EP07766 207 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 DANCRP0C864 163 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 UQCRBP14927 111 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 TNFRSF1BP20333 461 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 HTR2AP28223 471 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 NTF4P34130 210 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 OR1E2P47887 323 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 RGS8P57771 180 aaPredicted RBP11.78□□□□□ -0.52
CTSA-213ENST00000606782 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 IQCCQ4KMZ1 466 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 TIMM23BQ5SRD1 257 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 WBP2NLQ6ICG8 309 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 FKBP9P1Q75LS8 142 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 TSEN54Q7Z6J9 526 aaKnown RBP11.78□□□□□ -0.52
CTSA-213ENST00000606782 AQP12AQ8IXF9 295 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 ZNF433Q8N7K0 673 aaPredicted RBP11.78□□□□□ -0.52
CTSA-213ENST00000606782 FAM86B1Q8N7N1 296 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 ZNF563Q8TA94 476 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 HSH2DQ96JZ2 352 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 MCHR1Q99705 422 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 AMBRA1Q9C0C7 1298 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 GRIP2Q9C0E4 1043 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 OSGIN1Q9UJX0 560 aa11.78□□□□□ -0.52
CTSA-213ENST00000606782 DPRXA6NFQ7 191 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 STAMBPO95630 424 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 LY6G6DO95868 133 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 TFPIP10646 304 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 UMPSP11172 480 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 COPZ1P61923 177 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 FLOT2Q14254 428 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 ZNF672Q499Z4 452 aaPredicted RBP11.77□□□□□ -0.53
CTSA-213ENST00000606782 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 RANBP3LQ86VV4 465 aaPredicted RBP11.77□□□□□ -0.53
CTSA-213ENST00000606782 PIGXQ8TBF5 258 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 GEMIN6Q8WXD5 167 aaKnown RBP11.77□□□□□ -0.53
CTSA-213ENST00000606782 FBXW5Q969U6 566 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 ZNF775Q96BV0 537 aaPredicted RBP11.77□□□□□ -0.53
CTSA-213ENST00000606782 LRGUKQ96M69 825 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.53
CTSA-213ENST00000606782 TESQ9UGI8 421 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms