RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PKDREJQ9NTG1 2253 aa3.12□□□□□ -1.91
CKS1BP3-201ENST00000600888 HCFC1P51610 2035 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGKV3D-11A0A0A0MRZ8 115 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRAV17A0A0B4J275 112 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ENO4A6NNW6 628 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TCP11X1B4DZS4 312 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 KIF2AO00139 706 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDC7O00311 574 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TAPBPO15533 448 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CHST10O43529 356 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR1F1O43749 312 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 STK16O75716 305 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZFAND5O76080 213 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 GUCA1CO95843 209 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 HEXBP07686 556 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC35E2BP0CK96 405 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CCDC166P0CW27 439 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 GP1BBP13224 206 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CD1DP15813 335 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 STMN1P16949 149 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 IL1RNP18510 177 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CRABP2P29373 138 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAGEA4P43358 317 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 XCR1P46094 333 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAPZA2P47755 286 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TNFSF10P50591 281 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 PLTPP55058 493 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAB10P61026 200 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 STXBP1P61764 594 aaKnown RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 RGS1Q08116 209 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 C2orf54Q08AI8 447 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TSNQ15631 228 aaKnown RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 EXT1Q16394 746 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 WHAMMP3Q1A5X7 153 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 VWC2Q2TAL6 325 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 KBTBD12Q3ZCT8 623 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 FHL5Q5TD97 284 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SULT1C3Q6IMI6 304 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMIGD1Q6UXZ0 262 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SYT10Q6XYQ8 523 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SHISA6Q6ZSJ9 500 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ABHD13Q7L211 337 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 PRSS41Q7RTY9 318 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 LRRC70Q7Z2Q7 622 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 KIRREL3Q8IZU9 778 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CNPY4Q8N129 248 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 MMGT1Q8N4V1 131 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ST6GALNAC3Q8NDV1 305 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF740Q8NDX6 193 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR9A4Q8NGU2 314 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 RHEBL1Q8TAI7 183 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 STAG3L4Q8TBR4 150 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 UBTD2Q8WUN7 234 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 C8orf44Q96CB5 159 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 MOCOSQ96EN8 888 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 THOC1Q96FV9 657 aaKnown RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ATOH8Q96SQ7 321 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 LPAR4Q99677 370 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 EFCAB11Q9BUY7 163 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ILKAPQ9H0C8 392 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SHARPINQ9H0F6 387 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 DPH5Q9H2P9 285 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SPNS1Q9H2V7 528 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 RHBGQ9H310 441 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TRIM45Q9H8W5 580 aaPredicted RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 NMRAL1Q9HBL8 299 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF160Q9HCG1 818 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 AGPAT4Q9NRZ5 378 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 PLCXD1Q9NUJ7 323 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 ASF1BQ9NVP2 202 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TXNDC16Q9P2K2 825 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TEKT2Q9UIF3 430 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 PTBP2Q9UKA9 531 aaKnown RBP3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 RNF150Q9ULK6 438 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC22A14Q9Y267 594 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 NTNG1Q9Y2I2 539 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 NAALAD2Q9Y3Q0 740 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 MMACHCQ9Y4U1 282 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CSAG2Q9Y5P2 127 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 NCKAP5O14513 1909 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 NOTCH2Q04721 2471 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 TEX15Q9BXT5 2789 aa3.11□□□□□ -1.91
CKS1BP3-201ENST00000600888 CRYBG3Q68DQ2 2970 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 INTS1Q8N201 2190 aaKnown RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 LRIT2A6NDA9 550 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR5H15A6NDH6 313 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKDD1BA6NHY2 528 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SYCE1LA8MT33 242 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 C4orf51C9J302 202 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 K7EPI3 171 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SGK494L7N484 410 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 E2F3O00716 465 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 KERAO60938 352 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 RDH16O75452 317 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 SCELO95171 688 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 TBX6O95947 436 aaPredicted RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 FHP07954 510 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 STSP08842 583 aa3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 RNH1P13489 461 aaKnown RBP3.1□□□□□ -1.91
CKS1BP3-201ENST00000600888 EPORP19235 508 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms