RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 A4GALTQ9NPC4 353 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 SERINC1Q9NRX5 453 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 ADA2Q9NZK5 511 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 EMC3Q9P0I2 261 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 MALT1Q9UDY8 824 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 MKLN1Q9UL63 735 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 PMF1-BGLAPU3KQ54 211 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 TFPTP0C1Z6 253 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 T-ENOLP0DO92 83 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 PDLIM4P50479 330 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC7A2P52569 658 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 CSNK2A1P68400 391 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 CDK6Q00534 326 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 CHRNB3Q05901 458 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 RBBP4Q09028 425 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SCARB2Q14108 478 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 ZNF141Q15928 474 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 MAPK14Q16539 360 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 OR7E24Q6IFN5 339 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC15A3Q8IY34 581 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 PGAM4Q8N0Y7 254 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 C11orf65Q8NCR3 313 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 NFKBIDQ8NI38 313 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC38A5Q8WUX1 472 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 MAL2Q969L2 176 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 C3orf49Q96BT1 292 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 FBXO17Q96EF6 278 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 TMEM19Q96HH6 336 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 ZNF350Q9GZX5 532 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 TMEM38AQ9H6F2 299 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SPAG4Q9NPE6 437 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 CTPS2Q9NRF8 586 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 ANGPT4Q9Y264 503 aa14.37□□□□□ -0.11
SHKBP1-215ENST00000597649 ATP6V1G2-DDX39BF2Z307 99 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 EBAG9O00559 213 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 WIPF1O43516 503 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 MRPL33O75394 65 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 UGT2B17O75795 530 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 TGFAP01135 160 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 CHRM4P08173 479 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 GUSBP08236 651 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 UBTFL6P0CB48 400 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 ARAFP10398 606 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 TFPIP10646 304 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 APEHP13798 732 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC16A1P53985 500 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 LIPEQ05469 1076 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 FUT5Q11128 374 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 TYW3Q6IPR3 259 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 REEP3Q6NUK4 255 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 C8orf82Q6P1X6 216 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 ERICH5Q6P6B1 374 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC30A8Q8IWU4 369 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 C10orf111Q8N326 155 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 BBS10Q8TAM1 723 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 OR11A1Q9GZK7 315 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 MTHFD2LQ9H903 347 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 FKRPQ9H9S5 495 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC7A10Q9NS82 523 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 CMTM6Q9NX76 183 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 MOKQ9UQ07 419 aa14.36□□□□□ -0.11
SHKBP1-215ENST00000597649 PKD1L1Q8TDX9 2849 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 A0A0G2JPF8 293 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PRAMEF27A3QJZ7 478 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 HNRNPCL2B2RXH8 293 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 HNRNPCL3B7ZW38 293 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 GSTA4O15217 222 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 HNRNPCL1O60812 293 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 ATP5HO75947 161 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PMS2P2O95744 297 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 CSTAP01040 98 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 HNRNPCL4P0DMR1 293 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 BMP4P12644 408 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 RASSF2P50749 326 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 H3F3AP84243 136 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 RUNX1T1Q06455 604 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 CR1LQ2VPA4 569 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 INTS11Q5TA45 600 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PRAMEF8Q5VWM4 474 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PRAMEF7Q5VXH5 474 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 C6orf89Q6UWU4 347 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 CCDC121Q6ZUS5 278 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 NET1Q7Z628 596 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 ADGRG3Q86Y34 549 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 KRT73Q86Y46 540 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PEX5LQ8IYB4 626 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 RBM15BQ8NDT2 890 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 HIPK4Q8NE63 616 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 OR2T12Q8NG77 320 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PMM1Q92871 262 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 ZNF583Q96ND8 569 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 CDRT15Q96T59 188 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 PIMREGQ9BSJ6 248 aa14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-215ENST00000597649 FAM220BPB1ANY3 271 aa14.34□□□□□ -0.11
SHKBP1-215ENST00000597649 NDUFS8O00217 210 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms