RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 PNMTP11086 282 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 PRG2P13727 222 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ETFAP13804 333 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 CBR1P16152 277 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 NPR2P20594 1047 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 THBS4P35443 961 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 SRP14P37108 136 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 RPS5P46782 204 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 CAPZA2P47755 286 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 CHN2P52757 468 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 SH3BGRP55822 239 aaPredicted RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ARF1P84077 181 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 IL1RL1Q01638 556 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 HGFACQ04756 655 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 NPRL3Q12980 569 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 MAPK11Q15759 364 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ADRM1Q16186 407 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ZSWIM7Q19AV6 140 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 C3orf36Q3SXR2 165 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 RPS26P11Q5JNZ5 115 aaPredicted RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 NXNQ6DKJ4 435 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ZCCHC24Q8N2G6 241 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 GPR137CQ8N3F9 429 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 GLB1L3Q8NCI6 653 aaPredicted RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 MFSD8Q8NHS3 518 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 AENQ8WTP8 325 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF317Q96PQ6 595 aaPredicted RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 DOK1Q99704 481 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 TMEM109Q9BVC6 243 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 NELFAQ9H3P2 528 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 WDR55Q9H6Y2 383 aaPredicted RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 MOV10Q9HCE1 1003 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 SSU72Q9NP77 194 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 HAO1Q9UJM8 370 aa9.16□□□□□ -0.94
CHMP2A-202ENST00000596708 A0A0G2JPF8 293 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 HNRNPCL2B2RXH8 293 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 HNRNPCL3B7ZW38 293 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 TCF21O43680 179 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 HNRNPCL1O60812 293 aaKnown RBP9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 IGLV1-44P01699 117 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 IL6P05231 212 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 HNRNPCL4P0DMR1 293 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 KITP10721 976 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 IFNGR1P15260 489 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 EPHA3P29320 983 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 ARR3P36575 388 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 BST1Q10588 318 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 CEACAM16Q2WEN9 425 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF311Q5JNZ3 666 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 RNF220Q5VTB9 566 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 SERPINA11Q86U17 422 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 RFLNBQ8N5W9 214 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 FAM169BQ8N8A8 192 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 NUP37Q8NFH4 326 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 SLC38A5Q8WUX1 472 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 CKAP2Q8WWK9 683 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 ZBTB9Q96C00 473 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 TMEM19Q96HH6 336 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 OXGR1Q96P68 337 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 SNX18Q96RF0 628 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 SPATA9Q9BWV2 254 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF442Q9H7R0 627 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 RMND5AQ9H871 391 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 TPT1P8Q9HAU6 139 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 CRLF2Q9HC73 371 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 GPR35Q9HC97 309 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 SLC6A13Q9NSD5 602 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 RPS6KB2Q9UBS0 482 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 TMEFF2Q9UIK5 374 aaPredicted RBP9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 IFT52Q9Y366 437 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 PCDHB14Q9Y5E9 798 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 GPR45Q9Y5Y3 372 aa9.15□□□□□ -0.94
CHMP2A-202ENST00000596708 DSPPQ9NZW4 1301 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 IGHV2OR16-5A0A0B4J2B6 119 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 TMEM129A0AVI4 362 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 TRPC5OSA6NMA1 111 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 FTCDNL1E5RQL4 147 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 RPL36A-HNRNPH2H7BZ11 118 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 AKAP8O43823 692 aaKnown RBP9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 OR2T1O43869 369 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 LILRA1O75019 489 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 NPIPB7O75200 414 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 SLC22A3O75751 556 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 ADRA2AP08913 450 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 TACSTD2P09758 323 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 CBLP22681 906 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 GIFP27352 417 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 IL2RGP31785 369 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 MVDP53602 400 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 HOXC5Q00444 222 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 EGR4Q05215 589 aa9.14□□□□□ -0.95
CHMP2A-202ENST00000596708 DAG1Q14118 895 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms