RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 C6orf89Q6UWU4 347 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 RANBP3LQ86VV4 465 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 EPHX4Q8IUS5 362 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 C17orf78Q8N4C9 275 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 POU5F2Q8N7G0 328 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 WDR31Q8NA23 367 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 C1orf162Q8NEQ5 155 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 TAAR8Q969N4 342 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC47A1Q96FL8 570 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 POM121Q96HA1 1249 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 ALKBH3Q96Q83 286 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 KAT8Q9H7Z6 458 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 NANOGQ9H9S0 305 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 C12orf10Q9HB07 376 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 CAPN7Q9Y6W3 813 aa11.14□□□□□ -0.63
NPLOC4-213ENST00000573519 E7EQL1 145 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 M0QX08 132 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 M0R082 166 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 M0R3H8 397 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 OVOL3O00110 214 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FXYD1O00168 92 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 AIM2O14862 343 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 MFN2O95140 757 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 LGI1O95970 557 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 WNT11O96014 354 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 HEXAP06865 529 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 NQO1P15559 274 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 GRPRP30550 384 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 GZMMP51124 257 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 SEC24CP53992 1094 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 GYS2P54840 703 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 PCBP3P57721 371 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 RBBP4Q09028 425 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FAM69AQ5T7M9 428 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 AGAP6Q5VW22 663 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FAM91A1Q658Y4 838 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 C10orf53Q8N6V4 93 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC26A7Q8TE54 656 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 LRRC58Q96CX6 371 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 HS6ST2Q96MM7 605 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 ZNF587Q96SQ5 575 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 AMBRA1Q9C0C7 1298 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 USP22Q9UPT9 525 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 ATP23Q9Y6H3 246 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FLNAP21333 2647 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 DSCAMO60469 2012 aa11.13□□□□□ -0.63
NPLOC4-213ENST00000573519 IGKV1D-42A0A075B6H8 117 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 A0A096LPE4 126 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 A0A0B4J2E0 115 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 A0A1B0GX12 115 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 OR6C65A6NJZ3 312 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 SLC43A1O75387 559 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 UPK3AO75631 287 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 CD8AP01732 235 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 FABP6P51161 128 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 CDH12P55289 794 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 UBE2NP61088 152 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 TNK1Q13470 666 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 MAPRE2Q15555 327 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 HMBOX1Q6NT76 420 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 H1FNTQ75WM6 255 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 LINGO2Q7L985 606 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 NET1Q7Z628 596 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 FBXL14Q8N1E6 418 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 GPR32P1Q8NGA4 272 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 VANGL1Q8TAA9 524 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 EPYCQ99645 322 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 MCHR1Q99705 422 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 DHRS9Q9BPW9 319 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 ASPNQ9BXN1 380 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 FKRPQ9H9S5 495 aa11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 GDF2Q9UK05 429 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-213ENST00000573519 ZFHX3Q15911 3703 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 A0A087WUJ7 227 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 CPSF4LA6NMK7 179 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 BBIP1A8MTZ0 92 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 AKAP8O43823 692 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TPST2O60704 377 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 NDUFS7O75251 213 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TTKP33981 857 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 PCGF2P35227 344 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ACVR1BP36896 505 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TUBA1BP68363 451 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 TUBA4AP68366 448 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ROR2Q01974 943 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 MFSD13AQ14CX5 517 aa11.11□□□□□ -0.63
NPLOC4-213ENST00000573519 ETFDHQ16134 617 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms