RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CDK5R1Q15078 307 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 VASNQ6EMK4 673 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 OR7E24Q6IFN5 339 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 ZNF793Q6ZN11 406 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 OR13C3Q8NGS6 347 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 OR2L8Q8NGY9 312 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 CD300LFQ8TDQ1 290 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 DIO2Q92813 273 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 YIPF5Q969M3 257 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 NXPE3Q969Y0 559 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 SMIM19Q96E16 107 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 C20orf141Q9NUB4 165 aa9.71□□□□□ -0.85
USB1-212ENST00000566082 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 TEX13DA0A0J9YY54 714 aaPredicted RBP9.71□□□□□ -0.86
USB1-212ENST00000566082 IFITM5A6NNB3 132 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 HIDE1A8MVS5 230 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 PAPLNO95428 1278 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 RORAP35398 523 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 SELENOPP49908 381 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 TAS2R20P59543 309 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 RAB5BP61020 215 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 SPOCK1Q08629 439 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.86
USB1-212ENST00000566082 SLC6A19Q695T7 634 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 STEAP1BQ6NZ63 245 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 ZNF765Q7L2R6 523 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 IL17RCQ8NAC3 791 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 MORN4Q8NDC4 146 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 PHB2Q99623 299 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 MICU1Q9BPX6 476 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 A0A0B4J293 547 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 GPR75O95800 540 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 GP1BBP13224 206 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 CHAF1BQ13112 559 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 EIF2B1Q14232 305 aaKnown RBP9.71□□□□□ -0.86
USB1-212ENST00000566082 KRBOX4Q5JUW0 171 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 SFRP5Q5T4F7 317 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 LIPNQ5VXI9 398 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 OTPQ5XKR4 325 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 TMEM88Q6PEY1 159 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 TMEM91Q6ZNR0 172 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 NAXEQ8NCW5 288 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 TSSK2Q96PF2 358 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 INTS14Q96SY0 518 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 SLC38A3Q99624 504 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 MCCC2Q9HCC0 563 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 PPIL1Q9Y3C6 166 aa9.71□□□□□ -0.86
USB1-212ENST00000566082 A0A1W2PS29 197 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 C2orf74A8MZ97 194 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 D6RAR5 112 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 HOXB2P14652 356 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PRMT2P55345 433 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PCBP4P57723 403 aaKnown RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 RPS27AP62979 156 aaKnown RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 UBA52P62987 128 aaKnown RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 GPNMBQ14956 572 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 TOMM20Q15388 145 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 RPE65Q16518 533 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ZNF585AQ6P3V2 769 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ACBD4Q8NC06 268 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 VRK1Q99986 396 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 A0A0A6YYC8 382 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 I3L1I5 382 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 SRPX2O60687 465 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 ITGA5P08648 1049 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 RNH1P13489 461 aaKnown RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 HSD11B1P28845 292 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 TAS2R19P59542 299 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ERV3-1Q14264 604 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 CDONQ4KMG0 1287 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PRAMEF8Q5VWM4 474 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PRAMEF7Q5VXH5 474 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 CD300LDQ6UXZ3 194 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 OVCH1Q7RTY7 1134 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 SVBPQ8N300 66 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 FBXL6Q8N531 539 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 SLC25A44Q96H78 314 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 CNTNAP3BQ96NU0 1288 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 MS4A7Q9GZW8 240 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 A0A1B0GUH1 482 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 NPIPA5E9PKD4 350 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 H2BFMP0C1H6 154 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ZNF28P17035 718 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 CCR2P41597 374 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 POU3F4P49335 361 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ZNF616Q08AN1 781 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 GPR139Q6DWJ6 353 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 NHLRC1Q6VVB1 395 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PRR22Q8IZ63 422 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 MFSD9Q8NBP5 474 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PLPP7Q8NBV4 271 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 OR2A1Q8NGT9 310 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 RNF170Q96K19 258 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 TRAF4Q9BUZ4 470 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms