RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RASL10BQ96S79 203 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 PTDSS2Q9BVG9 487 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ALG8Q9BVK2 526 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF700Q9H0M5 742 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 AKAP7Q9P0M2 348 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TMED7Q9Y3B3 224 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 SF3B6Q9Y3B4 125 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 COL27A1Q8IZC6 1860 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TRAV36DV7A0A075B6V5 113 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 DAPL1A0PJW8 107 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 METTL15A6NJ78 407 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 CCNKO75909 580 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 PTGDSP41222 190 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 CDKN2AP42771 156 aaKnown RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 CTXN1P60606 82 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 NDUFA5Q16718 116 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 NUP54Q7Z3B4 507 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 KLBQ86Z14 1044 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 FAM83FQ8NEG4 500 aaPredicted RBP8.53□□□□□ -1.04
LINC00838-201ENST00000562956 SMPDL3BQ92485 455 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 TTC9Q92623 222 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 UFD1Q92890 307 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 IMMP1LQ96LU5 166 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 OR11A1Q9GZK7 315 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 FKRPQ9H9S5 495 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 HAO2Q9NYQ3 351 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 KLRF1Q9NZS2 232 aa8.53□□□□□ -1.04
LINC00838-201ENST00000562956 ANKUB1A6NFN9 424 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 MASP2O00187 686 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 NPIPB7O75200 414 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SLC25A12O75746 678 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 DKK1O94907 266 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 CD14P08571 375 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 FBXO45P0C2W1 286 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 HCCSP53701 268 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 GALEQ14376 348 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ISXQ2M1V0 245 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF404Q494X3 552 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 GDPGP1Q6ZNW5 385 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 RAB11FIP2Q7L804 512 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 MFSD4AQ8N468 514 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SLC22A8Q8TCC7 542 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SLC25A36Q96CQ1 311 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ASPNQ9BXN1 380 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 TXNL4BQ9NX01 149 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 PISDQ9UG56 409 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SSR3Q9UNL2 185 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 A0A1W2PQL4 384 aaPredicted RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SSX4O60224 188 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ITGA10O75578 1167 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 HIST1H2ABP04908 130 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 KRT8P05787 483 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 PRKCAP17252 672 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 SPI1P17947 270 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 CD40LGP29965 261 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 RPS19P39019 145 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 RPS18P62269 152 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF85Q03923 595 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 ACSM1Q08AH1 577 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 VASNQ6EMK4 673 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 LEG1Q6P5S2 330 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 HIST3H2AQ7L7L0 130 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 TIPARPQ7Z3E1 657 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 RFLNBQ8N5W9 214 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 CELF2-AS1Q8N7Q2 184 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 LSM14AQ8ND56 463 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 OR11G2Q8NGC1 345 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 HIST1H2ACQ93077 130 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 C1GALT1C1Q96EU7 318 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 CITED4Q96RK1 184 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 STRADBQ9C0K7 418 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 C6orf62Q9GZU0 229 aaPredicted RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 TAS2R5Q9NYW4 299 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.05
LINC00838-201ENST00000562956 VDAC3Q9Y277 283 aa8.52□□□□□ -1.05
LINC00838-201ENST00000562956 A0A1W2PNU3 283 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZSCAN5BA6NJL1 495 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 A8MVM7 634 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF670-ZNF695F2Z2N8 137 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 GALR2O43603 387 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 TFP02787 698 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 ZNF806P0C7X5 589 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 CELP19835 753 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 SDHAP31040 664 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 GABRA5P31644 462 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 FOLR3P41439 243 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 FABP5Q01469 135 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 INPP5JQ15735 1006 aaPredicted RBP8.51□□□□□ -1.05
LINC00838-201ENST00000562956 NTRK2Q16620 822 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 C1orf140Q5VVS0 124 aa8.51□□□□□ -1.05
LINC00838-201ENST00000562956 C22orf42Q6IC83 251 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms