RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 ZWILCHQ9H900 591 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 IL1RL2Q9HB29 575 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 RMND1Q9NWS8 449 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 TECRQ9NZ01 308 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 VPS18Q9P253 973 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 OR12D3Q9UGF7 316 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CIDEBQ9UHD4 219 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CFAP45Q9UL16 551 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 PSMD13Q9UNM6 376 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 NAV2Q8IVL1 2488 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 CSMD2Q7Z408 3487 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TSPAN11A1L157 253 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 A4D1N5 150 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GOLGA6L4A6NEF3 574 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TMEM110-MUSTN1A8MSY1 372 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PDZK1P1A8MUH7 402 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 F8VZ95 297 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 EEF2KO00418 725 aaKnown RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 MFSD11O43934 449 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 KIAA0513O60268 411 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PALMO75781 387 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ANXA9O76027 345 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 CPNE6O95741 557 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 EPOP01588 193 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PVRP15151 417 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 B4GALT1P15291 398 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 FOLR1P15328 257 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PSMA2P25787 234 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 OTX2P32243 289 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 NUDT1P36639 197 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GPR1P46091 355 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 POLR2FP61218 127 aaKnown RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 SLC34A1Q06495 639 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 BCL2L1Q07817 233 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 KLRB1Q12918 225 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 EIF3IQ13347 325 aaKnown RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 MEF2DQ14814 521 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ACKR1Q16570 336 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 MEP1BQ16820 701 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TPD52L1Q16890 204 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ANKRD55Q3KP44 614 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF658BQ4V348 819 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 UNC50Q53HI1 259 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 BRMS1LQ5PSV4 323 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 C1orf189Q5VU69 101 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 LRRC66Q68CR7 880 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PNCKQ6P2M8 343 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 NEK5Q6P3R8 708 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 DNAJC24Q6P3W2 148 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 WDR59Q6PJI9 974 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 CLEC18BQ6UXF7 455 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 SHISA6Q6ZSJ9 500 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 OTOAQ7RTW8 1153 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 BNIPLQ7Z465 357 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GALNTL5Q7Z4T8 443 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 HOOK3Q86VS8 718 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 LAX1Q8IWV1 398 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TUSC5Q8IXB3 177 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 FAM71AQ8IYT1 594 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GVQW1Q8N7I0 195 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TMEM35BQ8NCS4 154 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF397Q8NF99 534 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 OR10G6Q8NH81 332 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF671Q8TAW3 534 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 VN1R17PQ8TDU5 208 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GGHQ92820 318 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 FAM46BQ96A09 425 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 KIAA1143Q96AT1 154 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 DTD2Q96FN9 168 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 CDKN2AIPNLQ96HQ2 116 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 VSIG2Q96IQ7 327 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 AGPAT1Q99943 283 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 TTYH2Q9BSA4 534 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 NUDT9Q9BW91 350 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 SCRT1Q9BWW7 348 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 GSDMCQ9BYG8 508 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 WWP1Q9H0M0 922 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 OR2AG1Q9H205 316 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 NT5MQ9NPB1 228 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 ASF1BQ9NVP2 202 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 AKAP7Q9P0M2 348 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 SLC23A2Q9UGH3 650 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 MLXQ9UH92 298 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 APPL1Q9UKG1 709 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 KIAA1257Q9ULG3 409 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 HPCAL4Q9UM19 191 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 UBR5O95071 2799 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-219ENST00000556413 RP1P56715 2156 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 SDK2Q58EX2 2172 aa2.19□□□□□ -2.06
SCFD1-219ENST00000556413 PTPN13Q12923 2485 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TEX15Q9BXT5 2789 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 A0A0A6YYC8 382 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 BICDL2A1A5D9 508 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 KRT87PA6NCN2 255 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 I3L1I5 382 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 CCL22O00626 93 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 POLR1CO15160 346 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-219ENST00000556413 TTI1O43156 1089 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 HCRTR1O43613 425 aa2.18□□□□□ -2.06
SCFD1-219ENST00000556413 NUDT21O43809 227 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms