RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CCDC115Q96NT0 180 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 ALKBH3Q96Q83 286 aaPredicted RBP10□□□□□ -0.81
RAB5C-203ENST00000546881 SF3B5Q9BWJ5 86 aaKnown RBP10□□□□□ -0.81
RAB5C-203ENST00000546881 PRR14Q9BWN1 585 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 MTHFD2LQ9H903 347 aaPredicted RBP10□□□□□ -0.81
RAB5C-203ENST00000546881 CA10Q9NS85 328 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 YLPM1P49750 1951 aaKnown RBP9.99□□□□□ -0.81
RAB5C-203ENST00000546881 A0A096LPE4 126 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 A0A1W2PPZ6 126 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 LOC390937A0A1W2PQ73 354 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 AQP7P3A6NL99 342 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 VWC2LB2RUY7 222 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 FAAHO00519 579 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 C8BP07358 591 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 OR4A8P0C604 315 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 MAP2K6P52564 334 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 PRAMEF8Q5VWM4 474 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 PRAMEF7Q5VXH5 474 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 AP1ARQ63HQ0 302 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF836Q6ZNA1 936 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 MSANTD1Q6ZTZ1 278 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 CPLX4Q7Z7G2 160 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF440Q8IYI8 595 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 OR52P1PQ8NH57 321 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 STON2Q8WXE9 905 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 SPDL1Q96EA4 605 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 ADAM19Q9H013 955 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 OBP2BQ9NPH6 170 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 KLHL14Q9P2G3 628 aa9.99□□□□□ -0.81
RAB5C-203ENST00000546881 LRP5LA4QPB2 252 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 A8MVM7 634 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 B9A039 149 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 ANGPT2O15123 496 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 UPK3AO75631 287 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 KRT75O95678 551 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 RPS4Y1P22090 263 aaKnown RBP9.98□□□□□ -0.81
RAB5C-203ENST00000546881 ADIPOQQ15848 244 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 LIN52Q52LA3 116 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 C1QTNF12Q5T7M4 302 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 C1orf140Q5VVS0 124 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 METTL21CQ5VZV1 264 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 WBP2NLQ6ICG8 309 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 CGB2Q6NT52 195 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 SLC2A7Q6PXP3 512 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 SLC25A36Q96CQ1 311 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 ELAC2Q9BQ52 826 aaKnown RBP9.98□□□□□ -0.81
RAB5C-203ENST00000546881 KATNB1Q9BVA0 655 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 BPESC1Q9GZL8 116 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 RAB1BQ9H0U4 201 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 SEC61A2Q9H9S3 476 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 CACYBPQ9HB71 228 aaKnown RBP9.98□□□□□ -0.81
RAB5C-203ENST00000546881 MYOZ1Q9NP98 299 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-203ENST00000546881 MRGBPQ9NV56 204 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 P2RX2Q9UBL9 471 aa9.98□□□□□ -0.81
RAB5C-203ENST00000546881 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-203ENST00000546881 SH3PXD2BA1X283 911 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CDHR4A6H8M9 788 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 FRS3O43559 492 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 VAMP5O95183 116 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 BCHEP06276 602 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ERCC1P07992 297 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CECR9P0C854 216 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 PRG2P13727 222 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ETFAP13804 333 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF23P17027 643 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 GTF2E2P29084 291 aaKnown RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CALCRP30988 508 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 LSP1P33241 339 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 THBS2P35442 1172 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CRATP43155 626 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CAPZA2P47755 286 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 MRPL19P49406 292 aaKnown RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 SEC24CP53992 1094 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CLDN17P56750 224 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 TXNL4AP83876 142 aaKnown RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 IL1RL1Q01638 556 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ROR2Q01974 943 aaKnown RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 NAAAQ02083 359 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CR1LQ2VPA4 569 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 RPS26P11Q5JNZ5 115 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ANKRD16Q6P6B7 361 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 BLOC1S3Q6QNY0 202 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 CREB3L2Q70SY1 520 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 LINGO2Q7L985 606 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 SPATA21Q7Z572 469 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 EPHX4Q8IUS5 362 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 KDM8Q8N371 416 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 BCL2L2Q92843 193 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF317Q96PQ6 595 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 LEF1Q9UJU2 399 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 RASD1Q9Y272 281 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF443Q9Y2A4 671 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-203ENST00000546881 NDUFAF1Q9Y375 327 aa9.97□□□□□ -0.81
RAB5C-203ENST00000546881 ARPC4-TTLL3A0A0A6YYG9 625 aa9.96□□□□□ -0.82
RAB5C-203ENST00000546881 GMNCA6NCL1 334 aa9.96□□□□□ -0.82
RAB5C-203ENST00000546881 TMEM247A6NEH6 219 aa9.96□□□□□ -0.82
RAB5C-203ENST00000546881 OR6C65A6NJZ3 312 aa9.96□□□□□ -0.82
RAB5C-203ENST00000546881 VSTM5A8MXK1 200 aa9.96□□□□□ -0.82
RAB5C-203ENST00000546881 hCG_2039718K7EN88 272 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms