RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 OGG1O15527 345 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 FADS1O60427 444 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ABLIM3O94929 683 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CSF1P09603 554 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SPP1P10451 314 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 MNDAP41218 407 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CSNK1G2P78368 415 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SNTB1Q13884 538 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SCGB2B2Q4G0G5 96 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CAMKVQ8NCB2 501 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 STK35Q8TDR2 534 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CHST6Q9GZX3 395 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SAGE1Q9NXZ1 904 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 GPN3Q9UHW5 284 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF230Q9UIE0 474 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 MOKQ9UQ07 419 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SIGLEC7Q9Y286 467 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 HEATR5BQ9P2D3 2071 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 TTLL8A6PVC2 850 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF705EA8MWA4 302 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CCSO14618 274 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF749O43361 778 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 SSX5O60225 188 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 CLEC3AO75596 197 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 FARS2O95363 451 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 PAPLNO95428 1278 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 F12P00748 615 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 AKAIN1P0CW23 69 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 MAPK3P27361 379 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 PRAMEF17Q5VTA0 474 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 LGR4Q9BXB1 951 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 POFUT1Q9H488 388 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 TMEM231Q9H6L2 316 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 APMAPQ9HDC9 416 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 TAS2R8Q9NYW2 309 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 NCDNQ9UBB6 729 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 GTF2A1LQ9UNN4 478 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 IER3IP1Q9Y5U9 82 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 GPRIN2O60269 458 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 FBXO45P0C2W1 286 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 F3P13726 295 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 BDKRB2P30411 391 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 PPP2CBP62714 309 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 PPP2CAP67775 309 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 BTN3A2P78410 334 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ID2Q02363 134 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 HFEQ30201 348 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 FIGNL1Q6PIW4 674 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 FAM111BQ6SJ93 734 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF227Q86WZ6 799 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 INO80EQ8NBZ0 244 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 MIB2Q96AX9 1013 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 IGSF21Q96ID5 467 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 TM7SF3Q9NS93 570 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
SFSWAP-209ENST00000540469 ARID1AO14497 2285 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 OR6C68A6NDL8 312 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 PIN1P1O15428 100 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 GP1BAP07359 652 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 NDUFS1P28331 727 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 CACUL1Q86Y37 369 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 RNF113BQ8IZP6 322 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 GTPBP8Q8N3Z3 284 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 COX18Q8N8Q8 333 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 FAM83CQ9BQN1 747 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 PRSS27Q9BQR3 290 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 CCL26Q9Y258 94 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 TMEM218A2RU14 115 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 OR5H14A6NHG9 310 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 PCDH8O95206 1070 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 CXCL14O95715 111 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 CD3DP04234 171 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 METAP1P53582 386 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 PDZK1IP1Q13113 114 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 SMCO1Q147U7 214 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC48A1Q6P1K1 146 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 SYS1Q8N2H4 156 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC2A12Q8TD20 617 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 OR52A5Q9H2C5 316 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 IL21RQ9HBE5 538 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 MRPS30Q9NP92 439 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 PRSS16Q9NQE7 514 aa11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF629Q9UEG4 869 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 FARSAQ9Y285 508 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-209ENST00000540469 GXYLT2A0PJZ3 443 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms