RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 IRF8Q02556 426 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 RBBP4Q09028 425 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 CHIT1Q13231 466 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 E2F2Q14209 437 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 VMACQ2NL98 169 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ARMCX4Q5H9R4 360 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ANXA8L1Q5VT79 327 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 AGAP6Q5VW22 663 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 KHDRBS2Q5VWX1 349 aaKnown RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ANKRD34AQ69YU3 496 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 LAIR2Q6ISS4 152 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 LETMD1Q6P1Q0 360 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 MED27Q6P2C8 311 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 FAHD1Q6P587 224 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 VWA1Q6PCB0 445 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 BEND4Q6ZU67 534 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 C22orf34Q6ZV56 151 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF367Q7RTV3 350 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 LRRC70Q7Z2Q7 622 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF550Q7Z398 422 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SLC46A3Q7Z3Q1 461 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SYT9Q86SS6 491 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 MED12LQ86YW9 2145 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 CCDC103Q8IW40 242 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SLC44A2Q8IWA5 706 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 STX19Q8N4C7 294 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF615Q8N8J6 731 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 DOK4Q8TEW6 326 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 AKAP1Q92667 903 aaKnown RBP eCLIP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 PLPPR2Q96GM1 343 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 CEP19Q96LK0 163 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 Q96MT0 163 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SFXN2Q96NB2 322 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SIGLEC11Q96RL6 698 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 TMEM204Q9BSN7 226 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 COPS4Q9BT78 406 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 G6PC3Q9BUM1 346 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 C19orf24Q9BVV8 132 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 HDHD5Q9BXW7 423 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 GABARAPL3Q9BY60 117 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 NUAK2Q9H093 628 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SHARPINQ9H0F6 387 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 OPN3Q9H1Y3 402 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 RIBC2Q9H4K1 309 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SLA2Q9H6Q3 261 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 NEK6Q9HC98 313 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 NGBQ9NPG2 151 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SERHLQ9NQF3 203 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ABCB10Q9NRK6 738 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 FAM120CQ9NX05 1096 aaKnown RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 LYARQ9NX58 379 aaKnown RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 EHD3Q9NZN3 535 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 CNOT2Q9NZN8 540 aaKnown RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 KLRF1Q9NZS2 232 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 PDP1Q9P0J1 537 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-219ENST00000539952 PSORS1C1Q9UIG5 152 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 ZNF221Q9UK13 617 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 IKZF3Q9UKT9 509 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 POFUT2Q9Y2G5 429 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 GPR52Q9Y2T5 361 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 WIF1Q9Y5W5 379 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 SNX8Q9Y5X2 465 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 PTGDR2Q9Y5Y4 395 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 V9GYQ6 96 aa5.34□□□□□ -1.55
CPSF7-219ENST00000539952 VPS13CQ709C8 3753 aa5.34□□□□□ -1.56
CPSF7-219ENST00000539952 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 MED12Q93074 2177 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 NCKAP5O14513 1909 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.561e-7■■■□□ 17.2
CPSF7-219ENST00000539952 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 HMX3A6NHT5 357 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 MYO1GB0I1T2 1018 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 C9JVG2 144 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 CLIC1O00299 241 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 TAPBPO15533 448 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 WIPF1O43516 503 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 IDH3BO43837 385 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 XPNPEP2O43895 674 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 ZIC3O60481 467 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 PLAUP00749 431 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 CLPSP04118 112 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 SEMG1P04279 462 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 THBDP07204 575 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 DANCRP0C864 163 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 VSIG8P0DPA2 414 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 BCKDHAP12694 445 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 DRD5P21918 477 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 PRKACGP22612 351 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 PTBP1P26599 531 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPSF7-219ENST00000539952 SSTR4P31391 388 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 FMO3P31513 532 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 ACVR1BP36896 505 aa5.33□□□□□ -1.56
CPSF7-219ENST00000539952 RPL3P39023 403 aaKnown RBP5.33□□□□□ -1.56
CPSF7-219ENST00000539952 PTGDSP41222 190 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms